Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3048 ATGGATCTGTTCACCACCATCATATTACTATCTTTGTTCATTATCGTACTCATCATGAAATGGCAGTATTTCAAACACACAGACAAAAACTCACCTCCTTCACCTCCAAAACTACCCATACTCGGAAACTTGCACCAAGTAGGTTTGTTCCCGCACCGGTCACTCAAAAGCTTGGCTGAGAAACATGGCCCCTTGATGCTCCTTCACTTCGGGAACGTTCCGGTGCTGGTGGTGTCTTCGGCCGACATGGCGGAAGAAGTGATGAAGACGCACGACTTGGTGTTCTCCAACCGGCCACCGCGGAAGACGAGTGAGATACTCTTGTATGATTCCAAGGACATAGCCACCTCTCCTTATGGTGAATACTGGAGGCAGATAAGGAGCCTAGCCGTGTTACACCTTCTGAGCAACAAAAGGGTTCAATCGTACGGCCTTATTAGGGAGGAAGAAGCTGCAAGAATGGTTGAAACCATCAAAGAGTTTGCTTCTTCTTCTTTTTCTATGCCGTTAAACTTGTCTGAGATATTCTTCGGTGTTACAAATGACATATTGTGTAGAAGTGCTCTAGGGAGGAGATACCGTGGAGGAGGAGAAGGGTGCAAGTTTCAGGAGCTGGTTTTGGAGTTTGGAGACTTGTTGGGTACAACATCAATAGGGGACTATATTCCATGGCTTAGTTGGTTGAACAAGGTTGATGGTTCTTATAAAAGAGCGTCAAGAGTGGCCAAGCGTCTCGATGAGTTTTTGGATCAAGTGATTGCGGAGCATGTTAGTTCTGGGAAAAGGAAAGAACAAGAGGGACTTACTGATAATGTTGATGATTTTGTGGATGTTTTGCTTTCTGTCAAGAACAGTAACGCTGTTGGATTTGAGTTTGACACAACAACAATGAAGGCAATACTCGTGGACATGTTTACGGCAGGTACGGACCCTACGTACACTGTGCTAGAATGGGCAATGGCGGAACTGTTAAAACGGCCAGCAATTATGCACAAACTTCAAGATGAAGTGAGAACTGTTGTTGGAAACAGAAGCAACATAACCGAACAAGATTTGGTTCACATGAACTACTTGAAAGCTGTGATCAAAGAAACACTTCGGTTGCACCCTTCACTTCCAGTTCTAGTTCCTAGAGAATCCACCAAAGGCATCAAGCTGAAAGGGTATGACATTGAAGCTGGAACACAGGTGTTGGTGAATGCATGGGCCGTTGCAACGGACCCAAAGTGTTGGGACCAGCCACTTGAGTTCAAGCCAGAGAGGTTCTTAAACAGTTCGGTGGATTTCAAAGGGCGTGATTTTCAGTTTATTCCTTTTGGTGCAGGAAGGAGAGGGTGCCCTGGGCTGCAGTTTGCCACTGCTCTTGATGAAACTGTGCTGGCTAACCTTGTTTATCATTTTGATTGGGATTTGCCTGCTGGTTCTAAGGAATTGGACTTGTCTAAATTTTATGGACTAGTCCTGCATTTGAAATCACCTCTCTTGGCTATACCAACCCCTTATTATGAATGA 1512 0.4504 MDLFTTIILLSLFIIVLIMKWQYFKHTDKNSPPSPPKLPILGNLHQVGLFPHRSLKSLAEKHGPLMLLHFGNVPVLVVSSADMAEEVMKTHDLVFSNRPPRKTSEILLYDSKDIATSPYGEYWRQIRSLAVLHLLSNKRVQSYGLIREEEAARMVETIKEFASSSFSMPLNLSEIFFGVTNDILCRSALGRRYRGGGEGCKFQELVLEFGDLLGTTSIGDYIPWLSWLNKVDGSYKRASRVAKRLDEFLDQVIAEHVSSGKRKEQEGLTDNVDDFVDVLLSVKNSNAVGFEFDTTTMKAILVDMFTAGTDPTYTVLEWAMAELLKRPAIMHKLQDEVRTVVGNRSNITEQDLVHMNYLKAVIKETLRLHPSLPVLVPRESTKGIKLKGYDIEAGTQVLVNAWAVATDPKCWDQPLEFKPERFLNSSVDFKGRDFQFIPFGAGRRGCPGLQFATALDETVLANLVYHFDWDLPAGSKELDLSKFYGLVLHLKSPLLAIPTPYYE* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3048 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 500 - -
Ahy3g3048 503 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 SUPERFAMILY Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 Pfam Cytochrome P450 32 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g3048 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Ahy3g3048 503 PANTHER CYTOCHROME P450 71B11-RELATED 7 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3048 Ahy-Chr3 127572477 127582144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3048 3 501 Cytochrome P450 AT3G48280 47.817 1.24e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3048 - - gmx:100819183 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3315 13 130129587 130138256 Ahy3g3048 3 127572477 127582144 hybridization