Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3038 ATGGCTTATAGACGATGCCTATTGAAAAGAGGGAACCTTGTAGACTGGAAGTGTCACCCGTCTTTCAGTTATGTACTCTACAGCGATGATGGGAAACACAAGCAGCGCCCAGAAGAAAAATCATCCTCTGCAGCAATCAGTACTTTTGTCCAAACAAGGTCCTTCGGGAGCTCCCTTAATGGGTCAATGGGGTTTGGTGCCTCTTCTAGAGCGCTTTCCAACACATTCCTTTCCCCGTGCTCTGGATATAATTTCTGCCGATATATGTCGACTGTGAATGATGGATCAGATAAGATTGAGATGATGTCCGACATTGCAGATGTACTTACTGACAAGGCCGTTGAGACCATAGCTTCTCAGGCTCCTGTTTTTAACGAGGTTGCCATTGCTGCTGCTGATTCGTATTTGCCTGTGAAGTTGCTGCAGTATGGGATCGATGCTGTGCATACTTATACCGGGTTAAACTGGTGGGCAGCCATTGCTTTGGCAACCCTTGTGATTCGAAGCGCAACAGTTCCGTTCTTAATCTACCAACTTAAGGCTACATCTAAGCTTACATTGCTGAGGCCGCACATGGAAGCGATACGGGCTGAGATGGAATATAAGGCTATGGATCCCGTAGCTGCAGCTGAAAATCAAAAGAAGATGAAGCAGCTGTTTAAGGAATATGGTGTGAATCCGTTTACACCTTTGATGGGACTCTTTGTTCAAGCACCTATCTTTATTAGCTTTTTTCTTGCGATATCAAACATGGCTGAAAAGGTGCCATCATTTAAGCATGGTGGAACCTACTGGTTTACTGATCTCACTACTCCAGATGCATTATATGTTCTTCCTGTTTTGACTGCATTGTCGTTCTTAATAACAGTTGAGTGTAATATGCAAGAAGGCTTGGAAGGAAATCCTGTGGCTGGTACCATGAAAAATGTCTCTAGGGGTCTTGCTGTTCTTACAGTTCCCTTCACCATGGGGTTCCCAAAGGCCATATTTTGTTACTGGGTCACGTCAAATTTGTTTTCACTTGTGTATGGACTTGTGCTTAAAGTTCCTGGCATAAAGAAAACTTTAGGTATTCCTGAAATAGTTGCTGCAAAACCTACCACTGCTGCAGAACCACAATCTCCCTTTAATGTATTTCCAGCACTAAAAAAATCCACAGCAGAAGCAACTGAGCCAAGCTCATCACCAGTTGAACCATCAAAACATTCAAACAAAAAGATTTCTTCTTCTGCTGTTCTCAGCCAAAGGCTCAAAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACCTCAAGAGGTGA 1302 0.4316 MAYRRCLLKRGNLVDWKCHPSFSYVLYSDDGKHKQRPEEKSSSAAISTFVQTRSFGSSLNGSMGFGASSRALSNTFLSPCSGYNFCRYMSTVNDGSDKIEMMSDIADVLTDKAVETIASQAPVFNEVAIAAADSYLPVKLLQYGIDAVHTYTGLNWWAAIALATLVIRSATVPFLIYQLKATSKLTLLRPHMEAIRAEMEYKAMDPVAAAENQKKMKQLFKEYGVNPFTPLMGLFVQAPIFISFFLAISNMAEKVPSFKHGGTYWFTDLTTPDALYVLPVLTALSFLITVECNMQEGLEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGIKKTLGIPEIVAAKPTTAAEPQSPFNVFPALKKSTAEATEPSSSPVEPSKHSNKKISSSAVLSQRLKSLEKQVKGRKKNLKR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3038 433 Pfam 60Kd inner membrane protein 156 345 IPR001708 GO:0016021|GO:0032977
Ahy3g3038 433 PANTHER OXA1 76 406 IPR001708 GO:0016021|GO:0032977
Ahy3g3038 433 MobiDBLite consensus disorder prediction 387 417 - -
Ahy3g3038 433 MobiDBLite consensus disorder prediction 384 433 - -
Ahy3g3038 433 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 76 406 - -
Ahy3g3038 433 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 155 345 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3038 Ahy-Chr3 127416222 127421644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3038 136 354 Chloroplast and Mitochondria Gene Families AT2G28800 26.316 1.57e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3038 K03217 - gmx:100817052 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3306 13 130039548 130044213 Ahy3g3038 3 127416222 127421644 hybridization