Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3019 ATGGCTTGTGCAAATTTGGCATTGCATTTTCGAATTCTCATCATGTCAGTGATGATTTTTGCAGCTACTTTCTGTGTTGGAGACACTGACCCCCTTGATGTTGCAGCAATCAATAGCTTATATGTAGCACTAGGATCACCTCCCCTTCAAGGGTGGAAACCTACAGGAGGAGATCCATGTGTGGAACAGTGGCAAGGTGTCAGCTGTGTCTTCTCCAATATAACTGCTTTACAACTTGGAAGCATGAATTTGAGTGGACAGCTTGGAAGTAATTTGGATTTTCGATCCATCATAGAAATGGATATTAGCAACAACAGCATTGGAGGGACCATTCCATCCACTCTGCCATCTACTCTGAAGAGATTGTCTCTTTCGGAGAATAAGTTAAATGGAAGCATTCCAGATGCCTTATCCATATTAACTCAACTAACAGAATTGAATCTGTCAGGGAACAACTTGAGTGGTCACCTACCTCCCTCGATTGCGAATTTATCATCTCTTACTACATTACACTTGCAGGACAATCAACTTGGTGGAACCCTTTTTGTTTTGGAGGACCTCCCTCTTCAGAATCTGAATATAGAGAACAATCTATTCTCTGGGCCGATTCCTCCAAAGTTGTTGACTATTCCTGAATTCAGAAAAGATGGGAATCCCTTTAATACTACTATTATTCCCTCACCTCCAGCTGCAGCTCCTTCACCTGAAGCCATGGTTCCTTCTCCTTCCCCTACTCCTTCCACTGAAAAGTCACCTGGTAAAGCGGCAAAAAGTCCCTCAACGACCATGAAAGCTCCAACACCTTTGATCACTAGGAGTTCCTTTGAAGTTAAGAACATGGTTTGGTGGATTGCTGGTTTTGGGATCTTAATATTTATTGCGTTAGGAATTTGCCTTTTTATGTGCTGGTACTGTAAGAGAAAACCAAGGAGCAAGAATCATGAGGAACATAAAGACATGGATGTTTATATTGATGAAGAGAAAGGACAGGGCTCAAAACTTCCACCGCTGCAGCAAGCACCGCCACATCCTCTCCCAATAATTTCTGGAGAGAATTTCATCAGTCCAGCTAAATCCACCAAAGTAATTGAAGGTGGAAAACAAATTATAACTAGTTCCATCAGGGTTTATTCTGTTGCATTGCTTCAGCAGTATACAGATAGTTTTTCACAAGAAAATTATATAGGAGAAGGCACACTTGGCCCTGTTTATAAGGGTGAGCTCCCTGATGGAAAGTTGCTGGCTGTGAGGAAGCTGAATGCTTCCATGGTGCAAAATCATGAGCAGTTTCTTCAATTAGTATTCAGTATCTCCAAAATTCAACATCCTAACATTGTAAAACTTTTAGGCTACTGCGCGGAGCATAGCCAACGACTACTTGTGTATGAGTATTGCAGCAATGGAACCCTTCATGATGCATTGCATACTGATGATAACACTCGTGTTAAACTTTCATGGAACGAAAGAATCCAGGTGTCACTCGGAGCTGCTAGAGCTTTACAGTATCTGCATGAGAACTTCCAGCCACCTGTTGTGCAGCGAAATTTTCGATCTTCTAACATTCACCTGAATGACAAGATGGAAGTGTGTGTCTCTGACTGTGGATTAGGTTCTTTGCTATCTTCAGAGCAGGTCGTGACGGCTCAGGGCTATGATGCTCCAGAGTTTGAATCAGGGAGTTATACAGAAAAGAGTGATGTATTCAGTTTTGGAGTTGTGATGCTAGAACTCCTAACCGGGCGAAAAGCCTTTGACAGGTGGCGGCCTCGGGGAGAGCAATCTGTGGTGAGATGGGCAGTGCCTCAGCTGCATGACATTGATGCATTGTCTGAAATGGTAGATCCCTCCTTGAATGGAAGCTACCCTCCTCCTCCTATGAAATCCTTGTCACGTTTTGCTGATGTTATTTCTTCATGTTTACAGCATGAACCTGAATTCCGACCAGCAATGTCTGAAATCGTTCAGGATCTCTTGCGAATCACGTCAAGTCTTGGATGA 1998 0.4299 MACANLALHFRILIMSVMIFAATFCVGDTDPLDVAAINSLYVALGSPPLQGWKPTGGDPCVEQWQGVSCVFSNITALQLGSMNLSGQLGSNLDFRSIIEMDISNNSIGGTIPSTLPSTLKRLSLSENKLNGSIPDALSILTQLTELNLSGNNLSGHLPPSIANLSSLTTLHLQDNQLGGTLFVLEDLPLQNLNIENNLFSGPIPPKLLTIPEFRKDGNPFNTTIIPSPPAAAPSPEAMVPSPSPTPSTEKSPGKAAKSPSTTMKAPTPLITRSSFEVKNMVWWIAGFGILIFIALGICLFMCWYCKRKPRSKNHEEHKDMDVYIDEEKGQGSKLPPLQQAPPHPLPIISGENFISPAKSTKVIEGGKQIITSSIRVYSVALLQQYTDSFSQENYIGEGTLGPVYKGELPDGKLLAVRKLNASMVQNHEQFLQLVFSISKIQHPNIVKLLGYCAEHSQRLLVYEYCSNGTLHDALHTDDNTRVKLSWNERIQVSLGAARALQYLHENFQPPVVQRNFRSSNIHLNDKMEVCVSDCGLGSLLSSEQVVTAQGYDAPEFESGSYTEKSDVFSFGVVMLELLTGRKAFDRWRPRGEQSVVRWAVPQLHDIDALSEMVDPSLNGSYPPPPMKSLSRFADVISSCLQHEPEFRPAMSEIVQDLLRITSSLG* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3019 665 MobiDBLite consensus disorder prediction 219 266 - -
Ahy3g3019 665 SUPERFAMILY Protein kinase-like (PK-like) 370 657 IPR011009 -
Ahy3g3019 665 MobiDBLite consensus disorder prediction 248 266 - -
Ahy3g3019 665 Pfam Leucine rich repeat 99 153 IPR001611 GO:0005515
Ahy3g3019 665 SUPERFAMILY L domain-like 32 207 - -
Ahy3g3019 665 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 355 660 - -
Ahy3g3019 665 Pfam Protein tyrosine and serine/threonine kinase 392 657 IPR001245 GO:0004672|GO:0006468
Ahy3g3019 665 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Ahy3g3019 665 PANTHER LEUCINE RICH REPEAT KINASE 2 355 660 - -
Ahy3g3019 665 PANTHER LEUCINE RICH REPEAT KINASE 2 140 320 - -
Ahy3g3019 665 PANTHER LEUCINE RICH REPEAT KINASE 2 9 148 - -
Ahy3g3019 665 Gene3D Ribonuclease Inhibitor 35 229 IPR032675 -
Ahy3g3019 665 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 140 320 - -
Ahy3g3019 665 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 148 - -
Ahy3g3019 665 MobiDBLite consensus disorder prediction 226 247 - -
Ahy3g3019 665 Gene3D Phosphorylase Kinase; domain 1 354 464 - -
Ahy3g3019 665 Gene3D Transferase(Phosphotransferase) domain 1 465 664 - -
Ahy3g3019 665 ProSiteProfiles Protein kinase domain profile. 389 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3019 Ahy-Chr3 127098239 127102415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3019 12 652 Strubbelig Receptor Gene Family AT1G53730 39.769 1.48e-146 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Ahy3g3019 PK_Tyr_Ser-Thr 1.30E-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3019 - - gmx:100794130 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3284 13 129698843 129703036 Ahy3g3019 3 127098239 127102415 hybridization
Ahy3g3019 3 127098239 127102415 Ahy20g0505 20 5202397 5211477 PCT
Ahy3g3019 3 127098239 127102415 Ahy10g0320 10 2967680 2973301 PCT
Ahy20g0505 20 5202397 5211477 Ahy3g3019 3 127098239 127102415 PCT
Ahy10g0320 10 2967680 2973301 Ahy3g3019 3 127098239 127102415 PCT