Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2999 ATGTCGTTGTCGAAGAGTGCAATGGATGTTGACTCGGAACCACTCAGTTCACAAGACAACGTCGAAGATCCCATGATGACTAGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGTGGTGGCAGCAGTAGTAAGTGTGTGACTGTGACGGCCGATGATATTATAAACCAGACTTTTGAAACATCAGATGCAGCTTATAACTTGTATGTACGTTATGCGAGGTGTCTCGGGTTTGGAGTTCGCAAGGGTGATACAGCACGTGGAAAAGATGGAACACAGCGCAGAAGGAGGTTTTTTTGCAGCAAGGAAGGAAAGAGAGCCGAGAAATACATATCTAGTTTGAGTAGGAAGCGGGAGCATAGAGCGCTGACTCGCACTAGTTGTGAAGCCATGCTTGCGGTGTATCTTGACACTAAAACTTCGACTTGGAGGGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCACAATGCTTGGTACACCTAATTCCAAACCACCGAGGGTTGACTGAGCCACAAAAAGCTCAGGCGAATACCATGCATGATCATGGTCTTCCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGCCGGTGGTTATGCCAATGTCGGGTTCACAAAGAAGGACCTAGATAATCACTTTCAAAGAGCTCGTCGTGCAATGCTCATTGGTGGGGATTCCAATGCGACGATTAGCTATCTACTTGGGAAAGCAGATGTCGACCCGATGGCCATGACAAGGTACAGTGCTACTGATGAAGGTCGGCTGGCAAATTTATTTTGGGCAGATGGCATTTGTAGGTCCGATTATCAGTGCTTTGGAGATGTGATTGCATTCGATACAACCTACCGGAAGAATAAGTACAGAAGGCCCTTGGTAATCTTCTCAGGTTGTAACCATCATCGCCAAACATGTATATTTGGTTTTGCCTTGGTAGAGGACGAACGGACTGCAACATATACGTGGTTGTTGCAAAACTTTCTAGAAGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGACGGTGATGAAGCAATGAAGGCAGCAATTCGAGAAATCTTCCCAGATGCAACTCACCGATTATCTGGTTGGCACATTCAGAAGAATGTAACGGCAAACATAAAAAACAAAAATTTTTCCAACGACTTCAGAAGATGTTTGTATGCTCCATGGCATCCGGAAGAATTTGAAGAATATTGGGAGAATATGATAAAAAAATATGGGTTGGAGGAAAATGAATGGGTTCTGAGTGAATATGAGAAGAGGAAAAGTTGGGCAAGCGCTTACTTGAGGGATAAATTCTGTGCTGGATTTAGAACAACATCAAGGTGTGAGGCGATAAACAACTTCATTAAGAGGTTTATTGGCATTCGCCAAAGTCTTCTAGAGTTGGTCCAAAATCTTGAACATGCTCTTAGGGACTATAGAAACAATGAATTAGTTTCTCAATTTAAGACGCTGTATGGGGAGCCCGTTCTAACTACTGGGCTAGAAGCGTTGGAGCTTTCTGCTGCCAATTTTTACACTAGGGAGATTCTTGGAGATGTAAAAAAGGAGATTCAAGGAGTAGTCGCATTAGATGTAATAAATGAGGAAAACATATCAACCACTGTTGTGTTAAAAGTTAAGGAGTGTGACAGGAGACAACATACTTATAACGTACTTTACGATCGCAATACTGAGCATATGGAGTGTGAATGTAGTCGGTGGAGTAGTGAAGGCATTCCTTGCAGGCACATGTTTTGTGCAATGAAAAGGGTAGGTTTACAGAAGTTGCCAGATAGTCTTCTTTTGAGAAGATGGTCGAAGGATGCCAAGAAGTATCTGGATGAAAGTTCTGCTGGAGGCACTATGCAAGACAGAGAAAGAGAATTTTTGATGCGCTATGGCGCATTGTCAGTGGCAGCTACGTGGATGGTATTCTTAGGAGCTCAAGATGGTCCTTCTTTCCATGACACTATGAATGAAGTATATCGTTGGACCCAAACACTAGAACAAAAATCTGACTTGAAAAGACAAACAACAGATTCTACCACGCCAAACTTTGTTGGTGACCCTTCGGTGGTCAAGACAAAAGGAGCACCCAAGGGGAAAAAGGAGAGGGGTAAACGGAGGTGCACTAAATGCAACAGTGCTGGTCATGTAAAGAATAAATGTCCTGTGAGGAATGATGATGACGATTTGGGGGATAAGACTGGTAATGGCGCGCAAGCTAGCTTTGGTACCAAGGAGCTTCCCAAGGACCCTATGGCTTTTCAAGAGACATTAGCAGTGCCAAATACAGAAGTAAATGTACCTGTGCAGCAAGAGTCTGGGCTAGGTGATTCAGGATTGATTAATGGCCATGAGAATCCCATCCCACCGTATGGAAGTCATCAGTGGCTATTACAGGTTGTACAACAAGGACATTATTCGAAGTTCAATGGGATGCAGTAG 2448 0.4346 MSLSKSAMDVDSEPLSSQDNVEDPMMTSVEENVNCTCDCGGSSSKCVTVTADDIINQTFETSDAAYNLYVRYARCLGFGVRKGDTARGKDGTQRRRRFFCSKEGKRAEKYISSLSRKREHRALTRTSCEAMLAVYLDTKTSTWRVKKLVEKHNHDLVPQCLVHLIPNHRGLTEPQKAQANTMHDHGLPTSKIMGLMVGQAGGYANVGFTKKDLDNHFQRARRAMLIGGDSNATISYLLGKADVDPMAMTRYSATDEGRLANLFWADGICRSDYQCFGDVIAFDTTYRKNKYRRPLVIFSGCNHHRQTCIFGFALVEDERTATYTWLLQNFLEVMLNKSPSVVVTDGDEAMKAAIREIFPDATHRLSGWHIQKNVTANIKNKNFSNDFRRCLYAPWHPEEFEEYWENMIKKYGLEENEWVLSEYEKRKSWASAYLRDKFCAGFRTTSRCEAINNFIKRFIGIRQSLLELVQNLEHALRDYRNNELVSQFKTLYGEPVLTTGLEALELSAANFYTREILGDVKKEIQGVVALDVINEENISTTVVLKVKECDRRQHTYNVLYDRNTEHMECECSRWSSEGIPCRHMFCAMKRVGLQKLPDSLLLRRWSKDAKKYLDESSAGGTMQDREREFLMRYGALSVAATWMVFLGAQDGPSFHDTMNEVYRWTQTLEQKSDLKRQTTDSTTPNFVGDPSVVKTKGAPKGKKERGKRRCTKCNSAGHVKNKCPVRNDDDDLGDKTGNGAQASFGTKELPKDPMAFQETLAVPNTEVNVPVQQESGLGDSGLINGHENPIPPYGSHQWLLQVVQQGHYSKFNGMQ* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2999 815 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 57 625 - -
Ahy3g2999 815 ProSiteProfiles Zinc finger CCHC-type profile. 708 724 IPR001878 GO:0003676|GO:0008270
Ahy3g2999 815 MobiDBLite consensus disorder prediction 724 747 - -
Ahy3g2999 815 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 625 IPR031052 GO:0006355
Ahy3g2999 815 SMART 26again6 567 594 IPR006564 GO:0008270
Ahy3g2999 815 Coils Coil 462 482 - -
Ahy3g2999 815 Pfam MULE transposase domain 279 373 IPR018289 -
Ahy3g2999 815 MobiDBLite consensus disorder prediction 673 709 - -
Ahy3g2999 815 MobiDBLite consensus disorder prediction 1 23 - -
Ahy3g2999 815 ProSiteProfiles Zinc finger SWIM-type profile. 556 592 IPR007527 GO:0008270
Ahy3g2999 815 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
Ahy3g2999 815 SUPERFAMILY Retrovirus zinc finger-like domains 699 727 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2999 Ahy-Chr3 126848725 126856329 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g2999 MULE 1.20E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2999 - - ahf:112717474 1613.97