Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2998 ATGCCTTCCCCTGCTGCAAATCATTATTATATCTGTTCGGTATCACCATCCTTGCCCGGAACTACTGATGTCGCTATTATTCTGGTTAATGTTGCCGGCACTGTCCTCGTAGTGTTATTAATACGACATCGAGGAGGAACGATTGGTTCGGAGCATCCGATGAACTTAAATGGGTTGGGGGAACTGGTCCTTGCTGCAGGTCCTTCACCACTCGTACACTCCCTCCACATTGTGGCTTCTGAAGGAAGTGAGGGAGTATGGCGTGAAAAGGGAAATAGAGCAGATTCAGCGAAGCTCTCCTCCTGGGATTCTCCCAAACTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATGTTCTCGGTGATACAATTCATCAATTTCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTAAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAGAGTTATGTTGAGAAGGCATTCCTCAAGCCAAGTTCTTCCTTATGGAAATAAGAGACTTTGGTGCAAGATGTTTCTCTGGAGCCATAGGAACATACATAGAGCTATTTCAAGCAAATCAACACAGGTGAATCCTGGTGTGGCTGTAACGCACAATCCATACGGGTACTCTTCCGACACCCTTGAACCGAAGCACAAGCAGTCACCAGGAAATGTGGAATGGCTCTTCAGCTTAATACGCTTAGTATGTTCGCAATTGTTGATTCGCGGTGATGAACTAATTATGCGTTTGGGTGTTCTAAGAGGCGGCGCAGAGGTGGCAGTGAAGCGAATATCACAAGAGAATGACGGCGTGAGAGAGTTCCTAGCAGAAATTTCAAGCCTTGGAAGATTGAAGCAGAGAAACTTGGTTGCTCTGAGAGGATGGTGCAAGAAAGACATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAATGGGAGTTTGGATAAGAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAAATATCAAAGGTGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGCATAGCCATGGCCAAGTTGCTAGCACAAGAAAGTTGGTTGGAACAGTTGGTTGCATGGCTCCAGAAGTGATCAAGACCGGACAAGCCTTGACTCGCACGGATGTGTTCATGTTTGGAATCTTGATTTTAGAGGTCATGTGTGGAAGGAGGCCTATGGAAGAAGGTAAGCCACCTCTTGTGGAGTTTGTGTGGGGACTAATGGTTAAAGGGGAACTAATGAATGCACTTGATGAGAGGTTAAGTGCTAAAGGAGACTTCAATCTGCAACAAGTTGAGAAGGTTCTTCAGTTGGGATTGTTGTGTGCATACCCTGAACCAAAATCAAGACCAAACATGAGACAAGTTGTGAGTATTTTAGAAGGGAACAATGAGGGAGGAGAAGAATCAGAGAATGAGAATGCGGATACTTGTTTGCTTCTAAAGTTGAAATCTGGGGATATTTTTTCTGAGTATTCTAATTATTTAGCTATTCAACACACCCAACATTTGAAGATATTCGCCAGTCTAATACTTCTTCAATGTCTCTTACTTGGTCTAAATCTGTAG 1722 0.435 MPSPAANHYYICSVSPSLPGTTDVAIILVNVAGTVLVVLLIRHRGGTIGSEHPMNLNGLGELVLAAGPSPLVHSLHIVASEGSEGVWREKGNRADSAKLSSWDSPKLTRSCSNLERRDVLGDTIHQFPDSKSQSFENLQELTAGKVAANLKSPRSVMTHCSADRVMLRRHSSSQVLPYGNKRLWCKMFLWSHRNIHRAISSKSTQVNPGVAVTHNPYGYSSDTLEPKHKQSPGNVEWLFSLIRLVCSQLLIRGDELIMRLGVLRGGAEVAVKRISQENDGVREFLAEISSLGRLKQRNLVALRGWCKKDMGNFLLVYEYMDNGSLDKRVFCDESMMLNCEERIRNIKGVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMHSHGQVASTRKLVGTVGCMAPEVIKTGQALTRTDVFMFGILILEVMCGRRPMEEGKPPLVEFVWGLMVKGELMNALDERLSAKGDFNLQQVEKVLQLGLLCAYPEPKSRPNMRQVVSILEGNNEGGEESENENADTCLLLKLKSGDIFSEYSNYLAIQHTQHLKIFASLILLQCLLLGLNL* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2998 573 Gene3D Transferase(Phosphotransferase) domain 1 321 536 - -
Ahy3g2998 573 PANTHER - 261 552 - -
Ahy3g2998 573 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 261 552 - -
Ahy3g2998 573 Pfam Protein tyrosine and serine/threonine kinase 267 511 IPR001245 GO:0004672|GO:0006468
Ahy3g2998 573 SUPERFAMILY Protein kinase-like (PK-like) 255 512 IPR011009 -
Ahy3g2998 573 ProSiteProfiles Protein kinase domain profile. 224 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2998 573 SMART serkin_6 250 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2998 573 Gene3D Phosphorylase Kinase; domain 1 258 320 - -
Ahy3g2998 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2998 Ahy-Chr3 126829519 126838439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2998 261 459 Receptor kinase-like Gene Family AT4G04960 68.473 3.18e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy3g2998 PK_Tyr_Ser-Thr 1.50E-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2998 - - ahf:112782032 1113.21