Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2981 ATGCGGTTCCAGCATTTGACGCGCGGATGGTTGCAAAGATGCGGAAAGAGTTGCCGTCTGCGGTGGACAAACTATCTCCGGCCAGATATAAAGCGAGGTCGATTCTCCTTGGAAGAGGAGGAGACCATAATACACCTTCACAGCATTCTTGGAAACAAGTGGTCTGCAATAGCGTCGCGGCTGCCGGGGAGGACAGACAACGAAATAAAGAATTATTGGAATACACACATTAGGAAGAGGCTACTGAGGATGGGAATCGATCCTGTGACACACAGTCCACGCCTAGACCTTCTTGATCTCTCATCTCTCTTTGGTTCATCAATATCACACATCAACAATAACATGCAACACCATCTTAACCCTGAGCTTCTCAAATTGGCCACGTCACTCTTCTCTCCTAATAATAATAATAATAATTCTCTTGACAACAGCCACAACCAAATCATCAGTAGTGATGTTTCCTTGTCTTTCCCTCAAGCAAACTTTCTAGAATCCAATAATAATGTCGACTCAGCCTACCCATCAAATCTACTGCACCATGACCTAATGAATACTAGTGATTATTGGGACGCCGATAATAATAATAATATTGGAATTGCTTCAACTTCTAGCCCTTGTTATGTCACTGACCAATTACCAACAAGTTATTATTATAACAATAATAGTAACAACTACTACTCTCATCATGCAAGTCTTGTGGACCCACCTATGTCTGAAACGTCAACCTTTCATTCCAATAATAGCAGCAGTAATACTTATGTCAATGGAAACAACAGTAGCACCGAGGATGAGAGAGAAAGCTATGTCAGCACCAATAACAGCGTCTTGAGATTTGAAATCCCAGATATGTTGGATGTCAATGCATTCGTGTAA 873 0.417 MRFQHLTRGWLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEETIIHLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSLFGSSISHINNNMQHHLNPELLKLATSLFSPNNNNNNSLDNSHNQIISSDVSLSFPQANFLESNNNVDSAYPSNLLHHDLMNTSDYWDADNNNNIGIASTSSPCYVTDQLPTSYYYNNNSNNYYSHHASLVDPPMSETSTFHSNNSSSNTYVNGNNSSTEDERESYVSTNNSVLRFEIPDMLDVNAFV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2981 290 PANTHER TRANSCRIPTION FACTOR MYB41 11 285 - -
Ahy3g2981 290 SMART sant 31 79 IPR001005 -
Ahy3g2981 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 81 IPR017930 -
Ahy3g2981 290 Gene3D - 34 81 - -
Ahy3g2981 290 ProSiteProfiles Myb-like domain profile. 27 77 IPR001005 -
Ahy3g2981 290 Pfam Myb-like DNA-binding domain 32 76 IPR001005 -
Ahy3g2981 290 SUPERFAMILY Homeodomain-like 12 85 IPR009057 -
Ahy3g2981 290 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 11 285 - -
Ahy3g2981 290 Gene3D - 2 31 - -
Ahy3g2981 290 CDD SANT 34 77 IPR001005 -
Ahy3g2981 290 MobiDBLite consensus disorder prediction 237 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2981 Ahy-Chr3 126456406 126457653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2981 11 290 MYB Transcription Factor Family AT4G21440 48.750 2.22e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy3g2981 Myb_DNA-binding 1.50E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2981 K09422 - sind:105175448 238.424