Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2979 ATGGGAAAAAAATCAGCTGCGGCCACCGGGGAGGAGGAGGATGTTCCGCCGGACAACCTGAGGTGCGGGAGGACGGACGGGCGGCAATGGCGGTGCCGGCGGAGAGTGAAGGATAATCTGAAGCTGTGCGAGGTTCACTACCTTCAAGGTCGCCATCGCCAGTACAAGGAGAAGGTCCCTGAGTCCCTCAAGCTTCAGAGGAATAAGCGTAAGAGCCACTCTCCTCCTTCTTCTCCTCCTTCTTCTCCTGCCAACAATGTCGAAATTAGGGCACGCAAGGATTCCAAGATTGCTCTTCTCGCCAAAAAGAAGCGCAAGCTTTCCGATGGTACTTCAGAGGCATTGGTCGTTCAGAAGAAGAATAAGAACAAGAAAAGGAAAAACAAAAACAAGGGGTTGCGGAGTGGTGATGATAAGCATTTGGAGCTTATAAGGATGGTCTTGACGAGAGAGGTTGAGAAAAGGAAGAAGAGGAACAAGAAGAATGACGATGATGAAGAAGATGAAGAGTGCAGCGAAGGAGGAGAGTTGCGGAGAGAATTGCCGAATGGAGTGATGGCTATCTCTACAGCTTCAACCGCCAATGGTTTCAATGGCAATGTGGGTTCCCATTTTGATGTAAAAGTGGCTGCTGATTCTAATTCCAAAGCGTTCGCCGTCACGCCGCGTTACTTCAGGTCCAAGAATGTTGATAGAGTCCCTGTTGGCAGGTTGCAGGTTGTGCAGTATGGACAGGGCTTGAAGAAGAAGGGAAAGGGTAAGAAGAAGAGGTGTCATTGGTGCCAGAAGAGTAATTCTCAGAATCTTATCAAGTGTTCTAGCTGTAACAAGGAGTTCTTCTGCATGGATTGCATAAAACAGCGGTATTTTGGCACTGAGAATGAAGTTAAGAAGGCATGCCCTGTTTGTAGAGGAACTTGCACTTGTAAGGACTGTTTGGCAAGTCAATATAAAGACAGTGAAAGTAAGGAACATTCGGCTGATAAAAGCAGAGTTGGTAGAATATTGCATTTACATTACCTACTCTGTATGCTCCTTCCAGTACTGAAACAAATAAGTGAATATCAGGATACTCAGCTAGAAACTGAAGCAAGAATTAAAGGGATAGAAGCTTCTGATATTCACATCAGGCAGGTTGAATTTGGCTTCAATGAGAAAAATTTCTGCAATCACTGCAAAACTCCCATTTTGGATCTCAATAGAAGCTGCCCTAGTTGCTTATATAGCCTTTGCTTAAATTGTTTTCAAGAATTAAGTCAGGGAAGCATTTCTGGAGAATCAATGTTGAAGCTACCGATTAAAACAAAAACTTGCGCTGCCCGTGAGAAAGAAAATGCGGATGAGAAGGCCATTTCTAGTTGCAATATAACTCATTGTAATGGCACTGACAATGTATCATTTCCATCTACAGAACTTGGTGGTTGTGGTCATAGCCACCGTGATTTGAGATATATTTTTCCCTCTAGTTTGATCAAAGAGATGGAACTAAAGGCAGAAGAAATCATTTGCAGTTATGAATTGCCAGAAACACCAGACAAAAGTTCAAAATGCTCAATGTGTTCTGACACAGATCACAAAACTAAAAGACATAAGCAGTTGCAAGAAGCAGCTTTAAGAGGGGATTCAAATGATAATTGCTTGTTTAACCCCACAGTTTCGGACATCAATGGTGATAATTTTGAACACTTTCAAAAACACTGGGGAAAAGGCCATCCCGTAGTGGTGCAAGATGTTCTTCGAAAGACATCAAACCTCAGCTGGGATCCACTGATCATGTTCTGTAGTTATCTTGAGCGGAGCATTACAAGATACGAGAGTGATAAGGACTTACTTGAATCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTAGGCAGTCTTTTAGCGGGTCTCTCAAATGTCGTCCTTGCGAAAACACTTGCCATGAGATGCTGAAATTAAAGGGGTTGTTGTCTTCCCAACTTTTCAAAGAGCAATTTCCAGGTCATTTTTCTGAAGTAATTGATGCTCTACCAATTCAAGAATACATGAATCCTATGTCTGGTCTTCTGAATTTGGCAGCAAGTTTGCCACTTCAGAGTACTAAACACGACATTGGACCATACGTGCATATTTCATATGGCTGTGCCGACAAGGAAGCTGATTCTGTGACTAAACTCTGCTATGATTCATATGATGTGGTTAATATTATGGCACATACCACGGATGTTCCCCTATCTACAGAGCAGCTTTCAAAAATTCGACGACTACTGAAAAAGCATAAAGCTTTGTGTCGAAGGGATTCTTCTAAAATTACTGCTGAACAACAACAGGAAGAGAAAGTAAAAGAAACGTTACCACCACATGTTGAAGAAGTGGAACAAAAAGGTTCACAGCGAGTGGCCAAAGAAGTTGACTTTTTAAGGAGAGTCAATAGAACATCCTTTGTCTCAACTCACACTGAAAAAGCAACTACTGGAAGTATAGAGAACAGCTTTTCCCAGGATAGAGAATGTGATTTATCTGATTCCGATTCGGAACCCACAGTTCTCCATGGGTTGTCTACAGGCCGTAATCCAAGAAATCTGTTTGAAAGCTCGAAAGATAAAAATAAGTTATCTGCTGAGCATTCTGGGGCCCAATGGGATGTATTCCGCAGACAAGACGTTCCAAAGCTCATGGAATACCTTATAAGACATTGTGATGAATTTACTCATAACTATGACAATGACAAAGTGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACAAAAATCACAAAATAAGGCTTAAAGAGGAGTTTCAGGTTGAACCATGGACATTCAAGCAACATGTTGGAGAAGCCGTTGTCATTCCCGCTGGATGTCCATACCAGATCAGAAATCCTAAGTGTTGCGTTCATGTGGTGTTGGAATTTGTGTCACCGGAAAATGTCTCCGAGTGTATCCAGCTGATTGATGAGGTCCGACTGCTGCCGGCAGACCATAAAGCCAAAGTAGAAACTTTGCAGGTAAAGAAAATGGTGCTTCATAGCATGAATACAGCAATTAAGGAAATGCATGAGCTTACAAACAAGCCAGCCAAAACATGA 3078 0.4233 MGKKSAAATGEEEDVPPDNLRCGRTDGRQWRCRRRVKDNLKLCEVHYLQGRHRQYKEKVPESLKLQRNKRKSHSPPSSPPSSPANNVEIRARKDSKIALLAKKKRKLSDGTSEALVVQKKNKNKKRKNKNKGLRSGDDKHLELIRMVLTREVEKRKKRNKKNDDDEEDEECSEGGELRRELPNGVMAISTASTANGFNGNVGSHFDVKVAADSNSKAFAVTPRYFRSKNVDRVPVGRLQVVQYGQGLKKKGKGKKKRCHWCQKSNSQNLIKCSSCNKEFFCMDCIKQRYFGTENEVKKACPVCRGTCTCKDCLASQYKDSESKEHSADKSRVGRILHLHYLLCMLLPVLKQISEYQDTQLETEARIKGIEASDIHIRQVEFGFNEKNFCNHCKTPILDLNRSCPSCLYSLCLNCFQELSQGSISGESMLKLPIKTKTCAAREKENADEKAISSCNITHCNGTDNVSFPSTELGGCGHSHRDLRYIFPSSLIKEMELKAEEIICSYELPETPDKSSKCSMCSDTDHKTKRHKQLQEAALRGDSNDNCLFNPTVSDINGDNFEHFQKHWGKGHPVVVQDVLRKTSNLSWDPLIMFCSYLERSITRYESDKDLLESCLDWCEVEINIRQSFSGSLKCRPCENTCHEMLKLKGLLSSQLFKEQFPGHFSEVIDALPIQEYMNPMSGLLNLAASLPLQSTKHDIGPYVHISYGCADKEADSVTKLCYDSYDVVNIMAHTTDVPLSTEQLSKIRRLLKKHKALCRRDSSKITAEQQQEEKVKETLPPHVEEVEQKGSQRVAKEVDFLRRVNRTSFVSTHTEKATTGSIENSFSQDRECDLSDSDSEPTVLHGLSTGRNPRNLFESSKDKNKLSAEHSGAQWDVFRRQDVPKLMEYLIRHCDEFTHNYDNDKVMVHPILDQSIFLDKNHKIRLKEEFQVEPWTFKQHVGEAVVIPAGCPYQIRNPKCCVHVVLEFVSPENVSECIQLIDEVRLLPADHKAKVETLQVKKMVLHSMNTAIKEMHELTNKPAKT* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 841 855 - -
Ahy3g2979 1025 Coils Coil 1024 1025 - -
Ahy3g2979 1025 Pfam WRC 17 58 IPR014977 -
Ahy3g2979 1025 Gene3D Cupin 551 994 - -
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 53 68 - -
Ahy3g2979 1025 ProSiteProfiles Zinc finger RING-type profile. 258 304 IPR001841 -
Ahy3g2979 1025 SUPERFAMILY Clavaminate synthase-like 559 1007 - -
Ahy3g2979 1025 ProSiteProfiles JmjC domain profile. 679 985 IPR003347 -
Ahy3g2979 1025 ProSiteProfiles WRC domain profile. 16 62 IPR014977 -
Ahy3g2979 1025 PANTHER PROTEIN B160 12 1020 - -
Ahy3g2979 1025 SMART cupin_9 660 985 IPR003347 -
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 53 140 - -
Ahy3g2979 1025 Pfam JmjC domain, hydroxylase 871 966 IPR003347 -
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 153 176 - -
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 1 27 - -
Ahy3g2979 1025 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 12 1020 IPR045109 GO:0032454|GO:0033169
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 814 828 - -
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 89 110 - -
Ahy3g2979 1025 MobiDBLite consensus disorder prediction 814 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2979 Ahy-Chr3 126430021 126435214 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy3g2979 JmjC 1.50E-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2979 K15601 - gmx:100787798 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy3g2979 3 126430021 126435214 Ahy20g0545 20 5692388 5698384 PCT
Ahy3g2979 3 126430021 126435214 Ahy10g0356 10 3271400 3277676 PCT
Ahy20g0545 20 5692388 5698384 Ahy3g2979 3 126430021 126435214 PCT
Ahy10g0356 10 3271400 3277676 Ahy3g2979 3 126430021 126435214 PCT