Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2978 ATGACGTCACACCCACTCCATCCCACCTGCGACTTCGACACTGACTCCGTCGCCTCCTCCCCTCGCTCCGACAACTTCCACGACGCCCCTCAACGCGTCCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCTCGTCCTCACGACAACCAGCTCCGCTACGTCGGCGGTGACACCCGCATACTTGCCGTCAACCGCTCCATCTCCTTCCCCGCCTTCCTCCTCAAGCTCTCCAAGCTATCAGGTATGACCAACATAACCGCCAAGTACCAGCTTCCCAACGAGGACCTTGACGCGCTTATTTCTGTCACCACCGACGAAGACGTCGAGAACATGATGGACGAGTACGACCGCGTCGCACACAATCAAAATCCCCGATCCGCTCGTCTTCGCCTTTTCCTCTTTCCGGAATCATCCGTCGCCGACGATACCTCCCGAGCCGGCAGCATCAGCTCCCTCCTCAACGGCTCCGTTAAACGCGAGAGCTGGTTCCTCGATGCCCTCAACGGTGGCGTCTCAGCCCTCGAGCGAGGCCGCTCCGAAGCTTCCTCCATGGTCTCGGAGGTTCCCGATTACCTCTTCGGGTTGGACAACTCCGAAGAAACGCAAAGCAACCGCGAATTACGACATAAGGACCGACCCGGTCTATATTCGGATCCGGGTTCTCCTGCCCCAGTTGCGTCTCAATTTTCCTCCACATCATCAGTGCCGTGCGTGCCATCTATCCCCAACCTTCCACCAGTTAAAACCAAACCGGCGAACCCGGCTCCTGAAGTGGAGTCCAAGGAGATTCAAATCGAAGCTGAACCGGCTCCACAACCTCAACCGCAACCAAACACGTATCCGGGTAACACTGTTCTGCACTACGCCGCGGATGCCTCCTATTCGGGCCATTCTGTTCAACCGGTTCCGGTTTACTATTTTCCCGGTCCGGTTCAACCAGGAACTCTTCCGGTTCATATGCAGGCTCCATATCCATACGTTCAACAACCGTATCATGCAGTGGTTCCGGGTCAGGTTCCAGTCGGGTACCATCATTTGGTTCCGGGTTCGGGTCAAGTATATGGCGCAGGTCTGAGGCATGTAAGCCCGATGCACCATCCATACAGTGCATCTGCCACAGCAGCTGTGGTTCAAGACGGTGTGAAACAGCAGGTGTATCAGGCAGTGCCTGGTTCCGGTTACCCAGCAATGGTAATGACAGGTGGGGATGAACCACAGAGAGGTGGTTCGGAGTTTGTGGCGGGTCGGGTCGGGTCGCCAACTCCCTAA 1272 0.5692 MTSHPLHPTCDFDTDSVASSPRSDNFHDAPQRVRFMCSFGGKILPRPHDNQLRYVGGDTRILAVNRSISFPAFLLKLSKLSGMTNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAHNQNPRSARLRLFLFPESSVADDTSRAGSISSLLNGSVKRESWFLDALNGGVSALERGRSEASSMVSEVPDYLFGLDNSEETQSNRELRHKDRPGLYSDPGSPAPVASQFSSTSSVPCVPSIPNLPPVKTKPANPAPEVESKEIQIEAEPAPQPQPQPNTYPGNTVLHYAADASYSGHSVQPVPVYYFPGPVQPGTLPVHMQAPYPYVQQPYHAVVPGQVPVGYHHLVPGSGQVYGAGLRHVSPMHHPYSASATAAVVQDGVKQQVYQAVPGSGYPAMVMTGGDEPQRGGSEFVAGRVGSPTP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2978 423 PANTHER OS05G0427100 PROTEIN-RELATED 1 417 - -
Ahy3g2978 423 MobiDBLite consensus disorder prediction 1 25 - -
Ahy3g2978 423 MobiDBLite consensus disorder prediction 202 216 - -
Ahy3g2978 423 Gene3D - 53 136 - -
Ahy3g2978 423 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 417 - -
Ahy3g2978 423 MobiDBLite consensus disorder prediction 404 423 - -
Ahy3g2978 423 CDD PB1_UP2 36 135 - -
Ahy3g2978 423 Pfam PB1 domain 48 136 IPR000270 GO:0005515
Ahy3g2978 423 SMART PB1_new 47 137 IPR000270 GO:0005515
Ahy3g2978 423 MobiDBLite consensus disorder prediction 243 262 - -
Ahy3g2978 423 MobiDBLite consensus disorder prediction 200 233 - -
Ahy3g2978 423 SUPERFAMILY CAD & PB1 domains 48 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2978 Ahy-Chr3 126402201 126403919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2978 22 145 MAP Kinase Kinase Kinase AT3G46920 45.968 3.73e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2978 - - aprc:113858359 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3266 13 129424193 129426032 Ahy3g2978 3 126402201 126403919 hybridization