Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2973 ATGTGCTCTGCAGAAAATCCTCTCTGCCTTATCATGGGTCAAAATCAAAAACCAAAGTTACATTGCCATTATTGGCTGCTAAGTTCTTTGACAGTAGTCCTTCTTAACATCTCATTTGGCTCTTGCTTTGACACCATATCCACTGACAAAGCCCTCAGAGATGGTGAGATTCTTGTTTCTAGGGACAAGACTTTTGCTATGGGATTCTTCAGCCCAGGCAGGTCCACTTCCCGTTACATCGGAATCTGGTACAACAATCTGCCACAACAAACTGTTATTTGGGTTGCAAACAGAAACACTCCCATCGATGACACATCTGGGGTTCTCTCAATCAACCAACATGGAAATCTAGCACTCCACCATAATCATAGCATTCTTCCAATTTGGTCTACCAATGTTTCAGTCACACCTTCAGACACAAACAAAGTTATAGCTCAACTCACAGACATAGCCAACCTTGTTCTGATCCTTAACGACACCAAAACTGTCATCTGGCAAAGCTTTGATCAACCAACAGATACTTTGATTCCCCACCTGAGATTAGGATTTGACAGAGGAAAAGACCAGAGCTGGGTCATCCAATCTTGGAAAACAGATGATGATCCTTCACCTGGTGACTTCACATTGAAGTTCAGCACCAATGGTATGCCACAGTTGTTTTTATACCACAAGAATCTTCCATGGTGGCGAGGAGGACCGTGGAATGGTGAGTTTTTCATGGGTATACCCAACATGAAACGAGATAACAACATTTTCAATGTTTCTTGTGAGGAAGATGAGAACCATGCAGCACTCTCATATAACACCTATGACAAATCCGTTCCCAGTTGGGTGGTGGTTCAGCAATCTGGTTTCTTTCAAGTGTTCACTTGGGATAACCAGAAGAATCAGTGGAACCGCTACTGGTCAGAGCCTACTGGTCAATGTGATAACTATGGAACATGTGGACCTAACAGTAACTGTGACCCTTTGAACTATGAGGATTTTCAGTGCACTTGTCTGCCCGGGTTTGAACCGAAATTCCTGCGTAACTGGTATGAGAACAGAGATGGATCAGGAGGGTGTGCGAGGAAGAAAGGTGCATCTGTTTGTGGGAGTGGAGAAGGGTTTGTGAATATTGAAGGATTGAAGGTTCCTGATACATCTGTGGCTATAGTTAAGGAGGGTTTGAGTTTGGAGGAGTGTGAGAAGGAATGCTTGAGAAACTGTTCTTGCAGTGCTTATGCAGTTGCTAATGTGGCCAGTGGTGGAAGTGGATGCTTTGCATGGCATGGTGATTTGATGGACATAGAGAAGCTTAGTGATCAAGGCCAAGAAATATTTGTACGTGTTGATGCTGTTGAATTAGATAAAATGTTGCGGCAATTGAATCAAGATTCTCCTAGAGAAAACAGTGATGATATTCAAAGTAAAGGAGATCCAAATCTCCCCTTCTTCAGCATTAAAATAATCATGGCAGCCACAAAAAATTTTGCTCCTCAGAATAAACTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTCAGCTATACAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAGAGATTCTGGACAAGGAATAGAAGAATTTAAAAATGAAGTTACACTATTAGTTAAACTTCAACATAGAAATCTTGTGAGATTGCATGGTTGTTGCCTTGAAAAGGAAGAAAGAATGCTTGTCTATGAATACCTTCCAAACAGAAGTTTGGACTTCTTTATATTCGATAAACTCCAAAGGTCATTGTTAGACTGGGATCGGCGTTTTGAAATTATTTATGGGATTGCTCGAGGTGTGTTATATCTTCATCAAGATTCAAGATTAAAAATAATTCACAGAGATCTCAAAGCTAGCAATGTTCTCCTTGATGCCACAATGAATCCGAAAATCTCAGACTTTGGCATGGCTAGAATATTTGGCGAAGATCAAATCCAAGCCAGAACGAGAAGAGTAGTAGGAACATATGGTTATATGTCACCCGAATATGCAATGGAAGGACGATATTCAACAAAATCTGATGTCTTTAGTTTTGGAGTCTTACTTCTAGAGATTATTGCCGGCAAGAGGAACACAGATAGCAGCGACAAAGAAAGAGCCTCCCCAAATTTAATTGGATATGTATGGAAATTGTGGACAGAAGGAAAGGCTTTGGATATGGTAGACACAACACTAGACCAATCTTATCCTCCTGAGATAGCTTTGAAGTGCATTCAAATTGGACTATTGTGTGTGCAAGAAAATGTGAACAAGAGACCTTCCATGATGGAGGTTGTTTTCATGTTAGGGAATGAAGCACCTATTTGTCCACCTCAAAAGCCAGCATTTTTATTCAATGGCAACCAAGATGACTTGCAAGAGTCATCAACATCTGGAGGAGGATCTTCAATTAATGAAGTAACAGCAACTACCATCTCTGCTAGATAA 2430 0.4095 MCSAENPLCLIMGQNQKPKLHCHYWLLSSLTVVLLNISFGSCFDTISTDKALRDGEILVSRDKTFAMGFFSPGRSTSRYIGIWYNNLPQQTVIWVANRNTPIDDTSGVLSINQHGNLALHHNHSILPIWSTNVSVTPSDTNKVIAQLTDIANLVLILNDTKTVIWQSFDQPTDTLIPHLRLGFDRGKDQSWVIQSWKTDDDPSPGDFTLKFSTNGMPQLFLYHKNLPWWRGGPWNGEFFMGIPNMKRDNNIFNVSCEEDENHAALSYNTYDKSVPSWVVVQQSGFFQVFTWDNQKNQWNRYWSEPTGQCDNYGTCGPNSNCDPLNYEDFQCTCLPGFEPKFLRNWYENRDGSGGCARKKGASVCGSGEGFVNIEGLKVPDTSVAIVKEGLSLEECEKECLRNCSCSAYAVANVASGGSGCFAWHGDLMDIEKLSDQGQEIFVRVDAVELDKMLRQLNQDSPRENSDDIQSKGDPNLPFFSIKIIMAATKNFAPQNKLGQGGFGSVYKGQLYNGQEIAVKRLSRDSGQGIEEFKNEVTLLVKLQHRNLVRLHGCCLEKEERMLVYEYLPNRSLDFFIFDKLQRSLLDWDRRFEIIYGIARGVLYLHQDSRLKIIHRDLKASNVLLDATMNPKISDFGMARIFGEDQIQARTRRVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTDSSDKERASPNLIGYVWKLWTEGKALDMVDTTLDQSYPPEIALKCIQIGLLCVQENVNKRPSMMEVVFMLGNEAPICPPQKPAFLFNGNQDDLQESSTSGGGSSINEVTATTISAR* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2973 809 Pfam S-locus glycoprotein domain 229 341 IPR000858 GO:0048544
Ahy3g2973 809 Gene3D Transferase(Phosphotransferase) domain 1 567 768 - -
Ahy3g2973 809 SMART serkin_6 491 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2973 809 Gene3D Hepatocyte Growth Factor 362 443 - -
Ahy3g2973 809 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 27 457 - -
Ahy3g2973 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 202 IPR036426 -
Ahy3g2973 809 MobiDBLite consensus disorder prediction 780 809 - -
Ahy3g2973 809 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Ahy3g2973 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Ahy3g2973 809 PANTHER - 467 806 - -
Ahy3g2973 809 CDD PAN_AP_plant 364 444 - -
Ahy3g2973 809 Pfam D-mannose binding lectin 91 197 IPR001480 -
Ahy3g2973 809 Gene3D Phosphorylase Kinase; domain 1 465 566 - -
Ahy3g2973 809 CDD STKc_IRAK 497 763 - -
Ahy3g2973 809 Pfam PAN-like domain 364 430 IPR003609 -
Ahy3g2973 809 ProSiteProfiles Protein kinase domain profile. 491 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2973 809 SMART ntp_6 365 444 IPR003609 -
Ahy3g2973 809 ProSiteProfiles Bulb-type lectin domain profile. 43 168 IPR001480 -
Ahy3g2973 809 Pfam Protein tyrosine and serine/threonine kinase 494 761 IPR001245 GO:0004672|GO:0006468
Ahy3g2973 809 PIRSF SRK 16 468 IPR024171 GO:0004674
Ahy3g2973 809 PIRSF SRK 446 809 IPR024171 GO:0004674
Ahy3g2973 809 ProSiteProfiles PAN/Apple domain profile. 364 445 IPR003609 -
Ahy3g2973 809 SUPERFAMILY Protein kinase-like (PK-like) 474 779 IPR011009 -
Ahy3g2973 809 CDD B_lectin 52 171 IPR001480 -
Ahy3g2973 809 Gene3D - 40 168 IPR036426 -
Ahy3g2973 809 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 467 806 - -
Ahy3g2973 809 PANTHER - 27 457 - -
Ahy3g2973 809 SMART blect_4 49 171 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2973 Ahy-Chr3 126347703 126351685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2973 479 809 Receptor kinase-like Gene Family AT4G11530 55.786 1.44e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy3g2973 PK_Tyr_Ser-Thr 1.10E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2973 - - aprc:113859914 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy3g2973 3 126347703 126351685 Ahy20g0573 20 6047464 6050919 PCT
Ahy3g2973 3 126347703 126351685 Ahy10g0375 10 3470237 3475052 PCT