Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2972 ATGGCCCAAAACCATTATTCTCTGCTTAGTTCTTTGAGTGTAGTCCTTCTCAGCATCTCACTTACCTCATGTTCTGATACAATTACCATTGACAAACCCCTCAGAGATGGTGAGATTCTTGTTTCTAAGAGCAAAACCTTTGCCATGGGATTCTTTAGTCCAGGCAAATCCACTTCCCGTTACATCGGAATCTGGTACAACAACTTGCCAGAACAAACTGTGATTTGGGTTGCAAACAGAAACACTCCCATCAACGACACATCAGGGGTTCTCTCAATCAACCAGCATGGAAATCTAGCACTCTATAACAACTATACCACTCTTCCAATTTGGTCTTCAAATGTTTCACTCACACACTCCAACAACAACGTTGTAGCTCAACTCTTGGACACAGCAAACTTTGTTCTGTTCCAAAACAACACCGGAACCATCCTATGGCAAAGCTTTGATCACCCTACTGACACCTTCATTCAGCACTTGAAAGTTGGTTTTGACAGAAGAAGTAACAAGAGCTGGTTCCTCCAATCATGGAAGACAGATGATGACCCTGCTCCTGGTGCATACACGTTGGGATTCAACCCCAATGGGAAGCCACAGCTGTTCTTATACAACAAGAACCTTCCATGGTGGCGAGGAGGATCATGGAACGGTGAATTGCTCATGGGTATACCAAACATGAAACGAGACATGCTCAAATTCAATATTTCTTATGAGGAAGATGAAAACCATTCAGCACTCTCATACACCATGTTTGATGAGTCCATTGTGAGCAGAATAGTGGTTCAGCAATCAGGTTTCTTTCAAGTGTTCACCTGGGATTTCCAGAAGAGTCAGTGGAACCGGTACTGGTCAGAGCCAACAGGTCTATGTGATAACTATGGAACATGTGGATCTAACAGTAACTGTGACCCTTTGGACTATGATGAGGCCTTTCAGTGTAGTTGTTTACCTGGGTTTGAACCCAAGTTCCCGCGAAACTGGTATGAGAACAGAGATGGATCAGGAGGGTGTGTGAGGAAGAAAGGGGTGTCTGTTTGTGAGAATGGGGAAGGGTTTGAGAAGATTGAAAGCTTGAAGATTCCTGATACATCTATGGTAATAGTTAAAAAGGGTTTGAGTTTGAATGAGTGTGAGAAAGAGTGTTTGAGAAACTGCACTTGCAATGCATATTCAGTTGCTGATATTAGGAATGGTGGGAGTGGGTGCATGACATGGCATGGGGACTTGATGGACATTCAGAAGCTCAGTGATCAAGGCCAAGATCTTTTTGTCCGTGTCGACTCTGTTGAGCTAGCCAAGTACTATAAAAGACCAAGATTGTTTGGTAAAGACAAGTTGGTAGCGGCTCTGGTAGCTTTCATGCTTCTGGTTCTCCTTCTAGTGTCCAGTGTGTATTACTTGTGGAAGAAGAGTAAAAACAAAGCCACAGAAAAATTTTCTCCAGATAATAAGCTAGGCCAAGGTGGATTTGGCTCTGTCTTTAAGGGTCATCTATTTGATGGACAGGAGATAGCAGTAAAAAGACTCTCCAAAGATTCAGGTCAAGGAATAGAAGAGTTCATAAATGAAGTTACACTGCTAGTTAAACTCCAACACAGAAATCTTGTGAGGTTGCTCGGTTGTTGCCTTGAGAAGGAAGAAAGAATGCTAGTTTACGAATACCTTCCAAACAAAAGCCTAGACTTCCTCATATTTGATGAAGTTCGAAGATCATCGTTAGATTGGGGTCAACGCTTTAAAATTATTTCGGGAATTGCTCGAGGTGTATTGTATCTTCATCAAGATTCAAGATTGAAAATAATTCACAGAGATCTAAAAGCCAGCAATGTTCTTCTTGATGCTGTAATGAATCCCAAAATCTCAGACTTTGGAATGGCTAGAATATTTGGAGAAGAACAAATTCATGCAAGTACAAAAAAAGTAGTTGGAACCTATGGTTATATGTCACCTGAATATGCAATGGAAGGACGATACTCTACAAAATCAGATGTCTTCAGTTTCGGAGTCTTGTTATTGGAGATTATTGCTGGAAAAAGAAATTCAAATTGTGAAAAAGGAAGAGCAGCCTCCTTAATTGGATATGTGTGGAAACTTTGGACTGAAGGAAGGGCCTTGGATGTTGTAGATTCAACACTAGGCCAATCTTATCCTCCTGAAATAGCACTGAGGTGCATTCAAATTGGACTATTGTGTGTGCAAGAAAGCGTCAACAATAGACCTTCCATGTTAGAAGTTGTTTTCATGCTACGCAATGAAGCACCTATTTGTTCACCTCAGAAGCCAGCATTTTTATTCAATGGCAATCTGGACATGAAAGATTCATCAACATCTGGAGGAGGATCTTCAGTAAATGAAGTGACAGTAACTACCATCTCTGCTAGATAA 2385 0.4126 MAQNHYSLLSSLSVVLLSISLTSCSDTITIDKPLRDGEILVSKSKTFAMGFFSPGKSTSRYIGIWYNNLPEQTVIWVANRNTPINDTSGVLSINQHGNLALYNNYTTLPIWSSNVSLTHSNNNVVAQLLDTANFVLFQNNTGTILWQSFDHPTDTFIQHLKVGFDRRSNKSWFLQSWKTDDDPAPGAYTLGFNPNGKPQLFLYNKNLPWWRGGSWNGELLMGIPNMKRDMLKFNISYEEDENHSALSYTMFDESIVSRIVVQQSGFFQVFTWDFQKSQWNRYWSEPTGLCDNYGTCGSNSNCDPLDYDEAFQCSCLPGFEPKFPRNWYENRDGSGGCVRKKGVSVCENGEGFEKIESLKIPDTSMVIVKKGLSLNECEKECLRNCTCNAYSVADIRNGGSGCMTWHGDLMDIQKLSDQGQDLFVRVDSVELAKYYKRPRLFGKDKLVAALVAFMLLVLLLVSSVYYLWKKSKNKATEKFSPDNKLGQGGFGSVFKGHLFDGQEIAVKRLSKDSGQGIEEFINEVTLLVKLQHRNLVRLLGCCLEKEERMLVYEYLPNKSLDFLIFDEVRRSSLDWGQRFKIISGIARGVLYLHQDSRLKIIHRDLKASNVLLDAVMNPKISDFGMARIFGEEQIHASTKKVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNSNCEKGRAASLIGYVWKLWTEGRALDVVDSTLGQSYPPEIALRCIQIGLLCVQESVNNRPSMLEVVFMLRNEAPICSPQKPAFLFNGNLDMKDSSTSGGGSSVNEVTVTTISAR* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2972 794 CDD B_lectin 31 152 IPR001480 -
Ahy3g2972 794 ProSitePatterns Protein kinases ATP-binding region signature. 485 507 IPR017441 GO:0005524
Ahy3g2972 794 Gene3D Phosphorylase Kinase; domain 1 468 554 - -
Ahy3g2972 794 SMART ntp_6 347 426 IPR003609 -
Ahy3g2972 794 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Ahy3g2972 794 Pfam S-locus glycoprotein domain 210 323 IPR000858 GO:0048544
Ahy3g2972 794 PANTHER - 11 453 - -
Ahy3g2972 794 PANTHER - 474 791 - -
Ahy3g2972 794 SMART blect_4 31 152 IPR001480 -
Ahy3g2972 794 Gene3D Transferase(Phosphotransferase) domain 1 555 757 - -
Ahy3g2972 794 Pfam Protein tyrosine and serine/threonine kinase 482 746 IPR001245 GO:0004672|GO:0006468
Ahy3g2972 794 Gene3D Hepatocyte Growth Factor 344 424 - -
Ahy3g2972 794 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Ahy3g2972 794 CDD PAN_AP_plant 347 426 - -
Ahy3g2972 794 Gene3D - 20 150 IPR036426 -
Ahy3g2972 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 216 IPR036426 -
Ahy3g2972 794 Pfam D-mannose binding lectin 73 178 IPR001480 -
Ahy3g2972 794 Pfam PAN-like domain 346 412 IPR003609 -
Ahy3g2972 794 SUPERFAMILY Protein kinase-like (PK-like) 464 763 IPR011009 -
Ahy3g2972 794 ProSiteProfiles EGF-like domain profile. 286 325 IPR000742 -
Ahy3g2972 794 CDD STKc_IRAK 485 749 - -
Ahy3g2972 794 PIRSF SRK 1 474 IPR024171 GO:0004674
Ahy3g2972 794 PIRSF SRK 473 794 IPR024171 GO:0004674
Ahy3g2972 794 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 11 453 - -
Ahy3g2972 794 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 474 791 - -
Ahy3g2972 794 ProSiteProfiles Protein kinase domain profile. 479 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2972 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Ahy3g2972 794 SMART serkin_6 479 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2972 Ahy-Chr3 126343065 126347116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2972 470 794 Receptor kinase-like Gene Family AT3G45860 54.925 1.85e-118 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy3g2972 PK_Tyr_Ser-Thr 1.50E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2972 - - aprc:113859914 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy3g2972 3 126343065 126347116 Ahy20g0574 20 6072689 6077401 PCT
Ahy3g2972 3 126343065 126347116 Ahy10g0380 10 3583049 3588244 PCT