Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2968 ATGGCTGACGATGAGGATTTCCAAGGTGCAGCAGGGATTTGCGGTGAGAACTGGTGGAGGAGTATTGATTCAACAAGGAGTGTGTTTCCTCCTCTAACCTCATCATCACCATCTTCAACTTCACCTTGTTCCGTGGCACCACCCACCGACACTAGAACTTGGCCAAGTAGTGATGATCATCATCATTGTTTCATGGATTTGAAGGCACCGGCGTGTGATATTATTAGTAACAATAATAATAATAATTACCATATGAGTTTTCATGATGCGCAAGAGAAGCCACACAACAACAAGACTACTACTAATGAATCACAAAGTGGAAGCATGTTGATCGATTCAACCTTCCAAATGATGGGTTTTGGCTTGTCTTCACCCAATTGGGATCATCAATCTCTGTTAGAGAATAATAATTCACAAATAATCCAAAAGGATTATTGGAGCAGAAAGAACTTTGGAACCCAACAACAACAAGTTTCAAGTACCATGGATGTTTTCAAGCGCATGAACAACCAAGAATTTTCCTCATCAACTTATGGTTACCCGTCATCAACACTGATTCAAACATTATATGATCCACAGCAGCAGCCACAGCGCTCATCATCATCATCATCATCATCACTTTTCACCAACCGTTCCATGTCCTATTCATCATCTTCTACAGTGAATTATCATCATGCCTCCAATGAAGTGTCACTGTCACCAATCACATGGCCTAAACTCTTTTCTTCTTCTTCTTCTTCATCATCATCTTCTTCTTTATCACTACTTCCCCCAATGGCAAAGCACCCTGACAATAACAATATTGGACTTCACTTTTCCAACAACAACACCCCTTTCTGGAACGCTTCCTCCGACGCACTTCACGACATTAGAGCAGGTGCTTTTCCTTTTGAAGAAGAAGACAACAAACCCAATTCCCCCATTATTCTACTCAACAAGCTTAAGAGCGAAGAATTGTGTGTGGACTCGGTAAAGAAAAATAATAATGTTTGCTCATCACCACCTCCATTCAAAAGGGCAAGAATTGAAACTCCACCCCCTTTACCAACTTTTAAGGTTCGGAAAGAGAAGTTAGGGGACCGAGTTACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGACCGACACTGCATCCGTTCTCCACGAAGCTATTGAGTACATCAAGTTTCTTCACGATCAAGTCAGCGTTTTGAGCACTCCATACATGAAGAGTGGAGCTTCCATTCAACCCAATCAGGAATGTAATAATTGGAAAGAGTCACCAGAAGTGGCAAAACGAGATTTGAGAAGCCGAGGGCTATGTTTGGTACCAATTTCAAGCACATTCCCGGTTGCTACGGAGGTGAGTGCTGATTTCTGGACGCCAACATTGTCATTCGGAGGAGCACTTCTAAGATAG 1401 0.4226 MADDEDFQGAAGICGENWWRSIDSTRSVFPPLTSSSPSSTSPCSVAPPTDTRTWPSSDDHHHCFMDLKAPACDIISNNNNNNYHMSFHDAQEKPHNNKTTTNESQSGSMLIDSTFQMMGFGLSSPNWDHQSLLENNNSQIIQKDYWSRKNFGTQQQQVSSTMDVFKRMNNQEFSSSTYGYPSSTLIQTLYDPQQQPQRSSSSSSSSLFTNRSMSYSSSSTVNYHHASNEVSLSPITWPKLFSSSSSSSSSSSLSLLPPMAKHPDNNNIGLHFSNNNTPFWNASSDALHDIRAGAFPFEEEDNKPNSPIILLNKLKSEELCVDSVKKNNNVCSSPPPFKRARIETPPPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKSGASIQPNQECNNWKESPEVAKRDLRSRGLCLVPISSTFPVATEVSADFWTPTLSFGGALLR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2968 466 CDD bHLH_AtbHLH_like 348 399 IPR045239 -
Ahy3g2968 466 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 352 407 IPR036638 GO:0046983
Ahy3g2968 466 Gene3D - 352 412 IPR036638 GO:0046983
Ahy3g2968 466 PANTHER TRANSCRIPTION FACTOR BHLH103 51 448 - -
Ahy3g2968 466 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 448 - -
Ahy3g2968 466 MobiDBLite consensus disorder prediction 30 58 - -
Ahy3g2968 466 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 342 391 IPR011598 GO:0046983
Ahy3g2968 466 MobiDBLite consensus disorder prediction 30 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2968 Ahy-Chr3 126196051 126199059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2968 5 466 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.657 9.10e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2968 - - ahf:112791361 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy3g2968 3 126196051 126199059 Ahy20g0586 20 6248754 6251484 PCT
Ahy3g2968 3 126196051 126199059 Ahy10g0391 10 3757090 3759662 PCT
Ahy20g0586 20 6248754 6251484 Ahy3g2968 3 126196051 126199059 PCT
Ahy10g0391 10 3757090 3759662 Ahy3g2968 3 126196051 126199059 PCT