Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2928 ATGGAGAATTATACATATCCACCGTATCCTGAATCCAGCGAGTCGTCGCCGCGGTCGAGGGAGGTCGACTTCGAGAATCCGCCGCCGTGGGACGAGCAGCAGCCGCCGCCGACAAATTACAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCGCGCAGCCACGACAACCAGCTCTCCTACGTTGGCGGCGACACCAAGATCCTCGCCGTCGACCGCAACATCAAGTTCCCCGCCTTCCTCTCGAAGCTCGCCGCCCTCTGCGACTGCGCCTCGCCTGAGAACCTCACTCTCAAGTACCAGCTCCCCGGAGAGGACCTCGACGCCCTCATCTCCGTCACCACCGACGACGACCTCGATCACATGATGCATGAGTACGATCGCCTCTTCCGTGCCTCCGCAAAACCCGCCAGGATGAGGCTCTTCCTCTTCACCGCCTCAACTACCTCCGCTCCACCTAGTTTCTCCACTGATCGCGATCGCTTCGTGGAGGCTCTCAACTCGGGTCCCGTTCCGGTTCAACCCGATCCGGTCAAACCCCCTCCTGTTGCTCCTGCCAACGTTGATTTTCTATTCGGGCTTGAGAAGGCCGCGCCTCCTCCCCCTCAGCCGGCACCGCCTCTCGCCACCGTTAAGTTCCACGATCCTGTTCCGGAGCCTGTGGCGCCGCCACCGGAGTACCAGACGCGCGCAGCTGTGAACGATCGGGTTATTGGATCGGATCCCACCGTGAACCCGATCGACGTTCAAAGGCAGTTGCAGCAAGAGCTGCAGCGGTTGCAGATCGCGGAGGCTGATCAGTCTATGTACCGGAGGAGAAGTGAGGATGGCTTCGCTGGAGGTTATGGTGTTGCTGGGGGCGGCGATTATTACATGCAGAAAATGCCAGAGAAGGTTCCGATGTCGAATTCACCTGCTACTGTGCAGCACCCCGGGAATTACTGGCCGGAGAAGCAGTTTTCTGGTGAAGGTTTCCCAACGGCAATTTCGACGGCTCCCGGAGGTGGAGACCAACAGTTTTACGTTGTTCCGGCGCCGGGCACGTTCTATCATGCTCCAGTTGTGCGTCCGTCGGCGGCGCCGGTCACTCAAGGTTACTACGCTGTGCAACGTATGAATTCTGATGGATACCGTGAGCAGCCAGTGTACGGCGGCGCGCAGCCAGCTAAAGCAGCCTTTTCGTCTGCGGGAGCCACAAATATGGCACAGGCTCCACCGGGTAAGGCCCCTGGTTATCCAGAAGGATACGGCGTGGTTCGGCCAGCTGGAGTGCCGGATAATGTGGGGTCTGCTGCGTACGCGCAAGTTGCCTACGATAGTGGGAGTGGGAGACAGGTTTATTATACTGCGCCGGCTGGCGTCATGCACGCGCCGCAATATCAAGGGATTCCTCCACCGGTTACTGCTGCTGGGGGTTCGTTGGGCCAGGATGCTAGTAAAGTGGTAAACAAGGCTTCCCAAGGTTCTGTGTGA 1479 0.5909 MENYTYPPYPESSESSPRSREVDFENPPPWDEQQPPPTNYKAKFMCSYGGKIQPRSHDNQLSYVGGDTKILAVDRNIKFPAFLSKLAALCDCASPENLTLKYQLPGEDLDALISVTTDDDLDHMMHEYDRLFRASAKPARMRLFLFTASTTSAPPSFSTDRDRFVEALNSGPVPVQPDPVKPPPVAPANVDFLFGLEKAAPPPPQPAPPLATVKFHDPVPEPVAPPPEYQTRAAVNDRVIGSDPTVNPIDVQRQLQQELQRLQIAEADQSMYRRRSEDGFAGGYGVAGGGDYYMQKMPEKVPMSNSPATVQHPGNYWPEKQFSGEGFPTAISTAPGGGDQQFYVVPAPGTFYHAPVVRPSAAPVTQGYYAVQRMNSDGYREQPVYGGAQPAKAAFSSAGATNMAQAPPGKAPGYPEGYGVVRPAGVPDNVGSAAYAQVAYDSGSGRQVYYTAPAGVMHAPQYQGIPPPVTAAGGSLGQDASKVVNKASQGSV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2928 492 SMART PB1_new 56 148 IPR000270 GO:0005515
Ahy3g2928 492 CDD PB1_UP2 45 146 - -
Ahy3g2928 492 PANTHER OS05G0427100 PROTEIN-RELATED 1 488 - -
Ahy3g2928 492 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 488 - -
Ahy3g2928 492 MobiDBLite consensus disorder prediction 1 15 - -
Ahy3g2928 492 MobiDBLite consensus disorder prediction 1 37 - -
Ahy3g2928 492 SUPERFAMILY CAD & PB1 domains 57 152 - -
Ahy3g2928 492 Pfam PB1 domain 57 147 IPR000270 GO:0005515
Ahy3g2928 492 Gene3D - 62 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2928 Ahy-Chr3 125627056 125628817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2928 41 169 MAP Kinase Kinase Kinase AT3G46920 42.754 2.40e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2928 - - adu:107480527 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy3g2928 3 125627056 125628817 Ahy20g0659 20 7145465 7147253 PCT
Ahy3g2928 3 125627056 125628817 Ahy10g0458 10 4485604 4487394 PCT
Ahy20g0659 20 7145465 7147253 Ahy3g2928 3 125627056 125628817 PCT
Ahy10g0458 10 4485604 4487394 Ahy3g2928 3 125627056 125628817 PCT