Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2866 ATGAAAGCACTTTACCCTTTTTTCCAAAGTGTTTCTTCATTGCCACCAGCTTCCTCTCCTCTTCCAAACCTCTTCTCACCCTCTTCCTCCATAGGCCTCAACAAACTCACCCCAACACAAATCATCCAAATCCAAGCGCAGTTCCAACTTCGCCAACTTCAACAGCAACAAGTTATGTCTTCCACATGTGTCCAACACAGCAACCAAAAGCACCTTTCCCCAAAGGGGGTCCCCATGAAGCACGTGGCCACCACCCCAACCAAAGCCACAAAGCTTTACCGCGGTGTTAGGCAAAGACACTGGGGGAAGTGGGTGGCGGAAATCAGACTCCCCAAGAACCGAACCCGCCTCTGGCTGGGAACCTTCGACACCGCAGAGGAAGCAGCTCTGGCATACGATAACGCGGCTTACAAGCTTCGCGGTGAATTCGCACGCCTCAACTTCCCTCACCTTAAGCACCATGGTACCCGCGTCTTCGGTGAGTTTGGTGATTACAAGCCTCTCCCTTCTTCCGTGGATGCCAAGCTCCAAGCCATTTGCGACAAGTTGGCTCTTTCTCAGAAACAGGAGCCATGCCCCTCTCTTGTGAAGGTGGAGCAAGATCAAGTGCTTTATCCTGAGCTAGAAGATTTCAAAGTGGAGTCGGATGAATCATGTGCAGGATCGTCCTCCCCTGAATCGGCTGCGACCACTCTTTTTGATTTCTCGGATTGTTGCAAGTGGGAGGAACCGGTGAGTTTTGGCTTGGAGAAGTTCCCCTCCGTGGAGATTGATTGGGCAGCCATATGA 789 0.5171 MKALYPFFQSVSSLPPASSPLPNLFSPSSSIGLNKLTPTQIIQIQAQFQLRQLQQQQVMSSTCVQHSNQKHLSPKGVPMKHVATTPTKATKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGEFARLNFPHLKHHGTRVFGEFGDYKPLPSSVDAKLQAICDKLALSQKQEPCPSLVKVEQDQVLYPELEDFKVESDESCAGSSSPESAATTLFDFSDCCKWEEPVSFGLEKFPSVEIDWAAI* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2866 262 ProSiteProfiles AP2/ERF domain profile. 92 149 IPR001471 GO:0003700|GO:0006355
Ahy3g2866 262 CDD AP2 91 151 IPR001471 GO:0003700|GO:0006355
Ahy3g2866 262 Pfam AP2 domain 93 142 IPR001471 GO:0003700|GO:0006355
Ahy3g2866 262 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Ahy3g2866 262 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Ahy3g2866 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 26 194 - -
Ahy3g2866 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 213 262 - -
Ahy3g2866 262 SMART rav1_2 92 155 IPR001471 GO:0003700|GO:0006355
Ahy3g2866 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 26 194 - -
Ahy3g2866 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 213 262 - -
Ahy3g2866 262 SUPERFAMILY DNA-binding domain 92 150 IPR016177 GO:0003677
Ahy3g2866 262 Gene3D AP2/ERF domain 92 150 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2866 Ahy-Chr3 124331145 124332452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2866 1 262 AP2-EREBP Transcription Factor Family AT4G39780 53.731 1.57e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy3g2866 AP2 3.50E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2866 K09286 - gmx:100818839 274.248