Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2818 ATGGATTACTATTATGTGAACCCAATAAACCCCAATTACGGTGCTCATCATGATGATGACTACTCTGCCATGATGAGCATGTCTGATTTCATGATATCCGATTTTCTTATGGCTGATGATGATGCATATGGGTATGGTGTTGATGATCATCATCATCATAATAATCAAGAGAGTGGATCACAATCGCAAAGTACTAATGGATCGTCGGAGATGGCAACCTTCAGCGATGTCACTACTACCAATAATAATGGTGAAGCCTCTAGCATCAACAATAACATAAAATGCAAAAATGGGAGTAAGAGAAGTAAGAAAGAAGTGAATTCAAGAGTGGCGTTTAGAACGAAATCGGAGCTTGATGTTATGGATGATGGATACAGATGGAGGAAGTACGGAAAAAAGGCCGTCAAGAACACTCCAAATCTAAGGAACTATTACAAGTGTTCGAGTGAAGGATGCGGTGTGAAGAAGAGGGTGGAAAGGGACAGAGACGACTCAAGCTATGTTATAACAACCTATGAAGGGATACACAATCATGCAAGCCCTTTTACCTACTAA 555 0.4018 MDYYYVNPINPNYGAHHDDDYSAMMSMSDFMISDFLMADDDAYGYGVDDHHHHNNQESGSQSQSTNGSSEMATFSDVTTTNNNGEASSINNNIKCKNGSKRSKKEVNSRVAFRTKSELDVMDDGYRWRKYGKKAVKNTPNLRNYYKCSSEGCGVKKRVERDRDDSSYVITTYEGIHNHASPFTY* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2818 184 Gene3D WRKY domain 108 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g2818 184 MobiDBLite consensus disorder prediction 57 96 - -
Ahy3g2818 184 MobiDBLite consensus disorder prediction 48 108 - -
Ahy3g2818 184 SUPERFAMILY WRKY DNA-binding domain 113 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g2818 184 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 16 181 - -
Ahy3g2818 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 181 IPR044810 GO:0003700
Ahy3g2818 184 Pfam WRKY DNA -binding domain 122 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g2818 184 ProSiteProfiles WRKY domain profile. 116 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g2818 184 SMART WRKY_cls 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2818 Ahy-Chr3 123326537 123329418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2818 84 180 WRKY Transcription Factor Family AT5G64810 65.657 3.45e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy3g2818 WRKY 1.20E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2818 - - adu:107480370 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3144 13 126513148 126515849 Ahy3g2818 3 123326537 123329418 hybridization