Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2793 ATGGGTTGCGTTAATGGTAAGTTAGATTCTCCCATTCAAGAACGCCGCTTAAACAGATTGAAAAAGGAGTATGCTTATGCCAATCCCAAACTAACTTCATCTTCTTCTACGTCAACCATGAAACTAAAAAGCTACGATAACCATAGTTCTAACAGAAAAGAGAGCGTTAGTCATCCCAAAGATAATTACAGTAAGTTAAGGACTGGTGGCTATAGATATACAGATAAGGAAAAGGAAAAAACAGGGAAAAAGAAAACGGAAAAGGCTGTTGCTGCTAATGACATTGGTAAGTTGATGGAGGAAGAATCTAAGTTGTCCGAAGACAATATGAAAAAGAAAAATAAATTTGCAGGGTATGAAGTCGGTGAAGGTTGGCCCAAATGGTTGGCTGATAATATCCCTAAAGAGGTTTTGTCTGCTTTGGTTGCCAAGAGCGCTGACTCCTATGAAAAACTTGACAAAATTGGACGTGGAACATATAGCAATGTCTACAAAGCCCGTGATAAGGATACTGGAAAGATTGTTGCTCTGAAAAAAGTTCGTTTTGATACATCCGATTCTGAAAGTATAAAATTCATGGCGAGAGAGATTATGATACTGCAAAAGCTGGATCATCCCAATGTCATCAAGCTTAGAGGATTGGCAACATCTAGGATGCAATATAGTCTTTATCTCGTCTTTGATTATATGCAATGTGATCTTTCCAGAATTATCTCTCGTCCTGATGAGAGACTCACTGAGCCTCATATCAAGTGTTACATGCAACAATTGCTTGCTGGGCTCCAACATTGTCATGAGAGGGGAATTATTCACCGAGATATCAAATCTTCGAACTTGCTAATAGATAGAAGAGGTTCTTTAAAAATAGCAGATTTTGGTCTTGCAAATGTTGAACATCAAGGCCCTCTTACAAATCGAGTGGTGACACTTTGGTATAGGGCTCCTGAACTCCTCTTAGGTTCGACTGATTATGGATATAACATTGATCTATGGAGTGCTGGATGCTTGTTGGCTGAGATGTTTGTTGGAAGACCATTCATGCCCGGAAGGACAGAGGTTGAGCAGCTTCACCTGATTTTCAAACTATGCGGGTCTCCTCCAGAAGATTATTGGATAAAAATGAAGCTAAGATCAAGCTTCTTGCCCTCACAACATTACAAACCTAATTATGAGGACTACTTCCAAGGCTTTCCTTCCTCTTCATTGGATCTCTTGACCACACTTCTTCATCTTGACCCTGCATGTCGTGGCAGTGCTGCCTCTGCTCTTGAAACTGAATTCTTCAAAACTAGTCCATTAGCCTGTGACCCTTCAACCTTACCAGTGATCTACAAAGAAGAGGATGAACGCTCACATAAGAGACGCAAAAGACGCAAAGGTCACAATAACAAAGGGCAAATATCTTCTAAAACAAGGACAACTGGCACAAATGTATCAGAGAAGAACCAAACTGCTGAACAATCTTCAAAGGAACAGAAGATACAAGTTGAAGAAAAAGGAAGTAGCATAAACACATCATTACAGTTGATAGAGGAAAAAAGCATGAATACATCAACATCAATGTCCCCGATATTTCTTTCTACAGAAAGAAAATCACCAAAAACAGAGGGCCATCCTAATGCTCTTAAGAACATCAAGAATTACACTCTCTTACAGGCCTCTTTCGATATCATGAATAGAAATGAAGGCAACGAACTTGGTCCATTGCGTAGGTCCTTTTCTGCATTGGAATTTCGCCTTGACCATCTTGAGAAGCTTTCAAGTCTCTATGGACCAAACAAGAACTTAGGCCTTGGAATTTAA 1803 0.3971 MGCVNGKLDSPIQERRLNRLKKEYAYANPKLTSSSSTSTMKLKSYDNHSSNRKESVSHPKDNYSKLRTGGYRYTDKEKEKTGKKKTEKAVAANDIGKLMEEESKLSEDNMKKKNKFAGYEVGEGWPKWLADNIPKEVLSALVAKSADSYEKLDKIGRGTYSNVYKARDKDTGKIVALKKVRFDTSDSESIKFMAREIMILQKLDHPNVIKLRGLATSRMQYSLYLVFDYMQCDLSRIISRPDERLTEPHIKCYMQQLLAGLQHCHERGIIHRDIKSSNLLIDRRGSLKIADFGLANVEHQGPLTNRVVTLWYRAPELLLGSTDYGYNIDLWSAGCLLAEMFVGRPFMPGRTEVEQLHLIFKLCGSPPEDYWIKMKLRSSFLPSQHYKPNYEDYFQGFPSSSLDLLTTLLHLDPACRGSAASALETEFFKTSPLACDPSTLPVIYKEEDERSHKRRKRRKGHNNKGQISSKTRTTGTNVSEKNQTAEQSSKEQKIQVEEKGSSINTSLQLIEEKSMNTSTSMSPIFLSTERKSPKTEGHPNALKNIKNYTLLQASFDIMNRNEGNELGPLRRSFSALEFRLDHLEKLSSLYGPNKNLGLGI* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2793 600 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Ahy3g2793 600 Gene3D Phosphorylase Kinase; domain 1 137 231 - -
Ahy3g2793 600 MobiDBLite consensus disorder prediction 513 529 - -
Ahy3g2793 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Ahy3g2793 600 PANTHER CYCLIN-DEPENDENT KINASE 94 535 - -
Ahy3g2793 600 MobiDBLite consensus disorder prediction 27 88 - -
Ahy3g2793 600 Gene3D Transferase(Phosphotransferase) domain 1 232 469 - -
Ahy3g2793 600 SUPERFAMILY Protein kinase-like (PK-like) 144 434 IPR011009 -
Ahy3g2793 600 ProSiteProfiles Protein kinase domain profile. 149 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2793 600 PANTHER CELL DIVISION PROTEIN KINASE 94 535 - -
Ahy3g2793 600 MobiDBLite consensus disorder prediction 70 88 - -
Ahy3g2793 600 MobiDBLite consensus disorder prediction 466 490 - -
Ahy3g2793 600 SMART serkin_6 149 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2793 600 Pfam Protein kinase domain 149 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2793 600 MobiDBLite consensus disorder prediction 46 61 - -
Ahy3g2793 600 MobiDBLite consensus disorder prediction 513 541 - -
Ahy3g2793 600 MobiDBLite consensus disorder prediction 445 501 - -
Ahy3g2793 600 MobiDBLite consensus disorder prediction 28 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2793 Ahy-Chr3 122357825 122360500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2793 143 459 Core Cell Cycle Gene Families AT5G10270 47.337 4.27e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy3g2793 Pkinase 1.50E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2793 K08819 - gmx:102667260 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3120 13 125494901 125497598 Ahy3g2793 3 122357825 122360500 hybridization