Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2777 ATGATGATGAAAGAAAGCAATAATAATAAGAAGGCGTACATGGCAGTGATCCTGATACAAGCCATATACGCAGTGATGTTCCTTCTCTCCAAGGCAGCATTCGACCATGGCATCAACACCTTCATCTTCGTCTTTTATAGGCAGGCCCTTGCCACTGTTTTCCTCGCTCCTTTTGCTTTCTTCTTCGAACGCAAAACTGCACCACCTCTCTCATTTCTCACCATCTGCAAGATCTTCTTCCTTTCTCTCTTCGGGATCACGGGGAGCTTGGACGTATATGGTATTGCGCTTATATACACTTCACCCACTTTGGCTTCTGCTACCACTAACTGCCTTCCAGCCATTACCTTCTTCTTGGCACTTTTACTCAGGATTGAAATTCTGAAAGTAAAGACAGCAGCGGGTGTGGCTAAAATGGTAGGTGTGGTGGCATGCTTGTGTGGAGCTGCAACACTTGCTTTCTACAAAGGTCCTCATTTTCAGCTTTTAGGGCACCATCAAATACAACCATCTTCTTCTTCTCCTCCTCCTCCTTCTTCTTCTTGGGTAAAGGGTTGCTTCCTCATGCTCCTCTCTAACTTCCTTTTTGGGATTTGGCTTGTGCTACAGGGTTTTGTGGTGAAAGGATACCCTTCGAAGCTGCGTCTTACGACTCTTCAGTGTTTGTGTAGCTCAATTCAGTCTTTCTGCATTGCATATGGCGTAGAGAGAAGCATTGAGCAATGGAAGCTGAGTTGGAATGTCTCGCTCGTTGCCGTACTATACTGTGGAATAATGGTGACGGGTGTGACGTATTACATACAAACATGGGTGATAGAGAAGAAAGGGCCAGTGTTTCTGGCCATGTCAACGCCACTCGCTTTCATAATCACCGTCGTCTCCTCCGCAATTCTGCTGCACCAGATCGTAACTTTGGGAAGCATTTTAGGTGGGTTACTATTGGTTATAGGACTATATAGCGTTCTGTGGGGTAAGACAAGAGAGGAAATGCCCAAAGTCACAGACTTGGAGGTTGGATCGGAGCATCATCCCCCATTGCCGCCGCAATAA 1050 0.4619 MMMKESNNNKKAYMAVILIQAIYAVMFLLSKAAFDHGINTFIFVFYRQALATVFLAPFAFFFERKTAPPLSFLTICKIFFLSLFGITGSLDVYGIALIYTSPTLASATTNCLPAITFFLALLLRIEILKVKTAAGVAKMVGVVACLCGAATLAFYKGPHFQLLGHHQIQPSSSSPPPPSSSWVKGCFLMLLSNFLFGIWLVLQGFVVKGYPSKLRLTTLQCLCSSIQSFCIAYGVERSIEQWKLSWNVSLVAVLYCGIMVTGVTYYIQTWVIEKKGPVFLAMSTPLAFIITVVSSAILLHQIVTLGSILGGLLLVIGLYSVLWGKTREEMPKVTDLEVGSEHHPPLPPQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2777 349 PANTHER WAT1-RELATED PROTEIN 12 330 - -
Ahy3g2777 349 Pfam EamA-like transporter family 11 143 IPR000620 GO:0016020|GO:0016021
Ahy3g2777 349 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Ahy3g2777 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 327 - -
Ahy3g2777 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Ahy3g2777 349 PANTHER WAT1-RELATED PROTEIN 12 330 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2777 Ahy-Chr3 121784368 121786800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2777 8 256 Nodulin-like Gene Family AT5G64700 61.089 1.08e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2777 - - ccaj:109799350 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3102 13 124897801 124900619 Ahy3g2777 3 121784368 121786800 hybridization
Ahy3g2777 3 121784368 121786800 Ahy20g1963 20 110108884 110113930 PCT
Ahy3g2777 3 121784368 121786800 Ahy10g1530 10 89002363 89015162 PCT
Ahy20g1963 20 110108884 110113930 Ahy3g2777 3 121784368 121786800 PCT
Ahy10g1530 10 89002363 89015162 Ahy3g2777 3 121784368 121786800 PCT