Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2769 ATGGCACCGCGTGACGGCGGCGGAGATGGGACTCGGCCGCCATTGTTGCGGTCTACACGGGGCCGCCATCAGTCCTTGCCGTCGAGGTTCAATGACTCGGTTCTTGATTCATGGAAGAACCAAGGAGTCAAAGTGGAGGACACGGATTCCAGCTTTGAGGATGATGCAGATGAAGAGAAGAAAAAGAAGGGTGATAATTATTGTGCTCTTGAAGTGAATATAGAGATGGAAAAGAATGGTTTTGTTAAAACTGAGAGTAACAGTTCTGTCATTCTGTGCTTAGTTTTGAAGGTGGTGTGGAGCAGAAGGTTAAAACTACTGGGAATGGTGGTGAGGAGGAAACAGGTTTACAGGCCGGAGGATTTCGCGTTGGGTGATATAGTTTTGGCGAAGTGTGGGAAAAGGTACCCTGCTTGGCCTGCTGTGGTGATTGATCCTATCTTGCAGGCTCCGAAATCCGTCCTCAGCTGCTGCGTTCTTGGTGCACTCTGCGTCATGTTCTTTGGCTTTTCGAAAAATGGGACCCAAAGGGACTATGCTTGGGTAAAGCAGGGAATGATATTCCCCTTCTCTAAGTTCATGGAAAGATTCCAGGGTCAGACACAGTTGTACAAGAGCAAACCGAGTGACTTTTGCATGGCATTGGAGGAGGCAATGCTGGCTGTAGATGGTCTTCTCAACTCACAGCTGGAAGTAGAGGAAGTAACTTATGTAAATGCTTATCCGTATGGATATTTAGAGCCCCCAGCCATGCCTGTTGATGATGAATACCACTGCGAGGATCAAGATACAATATCTTGTGCTGGCTGTTATTTGATGTTGCCATGCAAAACGATGAAGAAGATTAAGGACCCAAGTGGTGCATCTCAATTTTATTGCAAACATTGCTTTAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCACATGGTGGGAATTGGGTGTGCTGTGATCGCTGTAATGTTTGGGTGCATGCTGAGTGCGATAAAATATCCATTGAACTTTTCAAGGATCTTGAAAACACAGATTACTATTGCCCAGCGTGCAAGGGAAATTTCAATAAGAAAGTACCCATACCCAAAACAAGCAAGTCAAAAAAGAAGTATAATGTGGAAGACAGATTGGTAGAGAATAGCCAAAAATCTATAGTACCTGAGACGGTAACAGTGGTGTGCAATGACATGGAAGGACTCTACTTCCCAAAGCTTCATTTAATTATGTGCAAGTGTAGCTCTTGTGGTTCAAGGAAGCATACACCAAGTGAATGGGAAAGGCACACAGGTAGCAGAGCCAAAAAATGGAAACATAGTGTGAAAGTGAAAAGCATGATGCTCCCACTAGAAAAATGGATCACAGAAAACATTTCACAAGATGGAGTTCCACAACAGTTAGATCAGCAGCAGGTGCTTAGCTTTTTGCAAGAAAATTATGAGCCAGTTCATGCAAAATGGACAACAGAAAGATGTGCAGTTTGCAGATGGGTAGAAGATTGGGAAGATAAAAAAATTATTATTTGTAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAAGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACACCAGATGTGGAGAGAGACTGTTGCCTCTGTCCTGTAAAAGGTGGTGCTCTAAAACCAACTGATGTTGAGATGCTATGGGTTCATGTGACATGTGCTTGGTTTCAACCTCAAGTGGTTTTCCAAAATCATGAGGCCATGGAACCTGCGGTAGGAATACTGAGAATTCCTCCTAATACCTTTGTTAAGGTAGAACTCTGAGCTAAAAAGGTTATTTTGGCTTTTGTACACACACACACACACAGGTGTGCTTCGAGAGCAGGATATAGCACAGAATTGCATTCTGTGGAGAAGAATGGGACTCAAATAACAAAGAAGCTAATATACTGTGCAGTTCACAGGGTCCCAAATCCAGAATCTGTATTGGTTGTACATACTCCTGGGGTTTTCTCTCCCAGAGCCTCTCTTGAAAATCATAGAAGATGCTTCCGGGGGTCAAGGCTGGTTTCATCAAAGAATGTAGAGCTTATTCAATCTTCAAACTCTGAAGGTGACAAGATTGAGCCATTTTCTGCTGCAAGATGTCATGTATACTGTAGATCACTGAATAAGAAGGCTGAAATACCAATAATTCACTTGCTGAAGGGACCCGGCCATCATTCTTTAAGTGCAATAACTCAGTTGAACAGCTATAAGGATTCTGAAGATTCTAAAGTATTTACTTCTTTCAAGGAACGACTTCATCATTTACAGAAAATGGAAAAGCTTCGAGTTTGCTTTGGAAAATCGGGTATCCATGGATGGGGTCTTTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGCATTGAGCGGGTAAGGCGAAGTGTTGCTGATTTAAGGGAAGTGAAATACCGTGCAGAAGGAAAAGATTGCTATCTGTTCAAGATCAGTGAGGATGTGGTAATTGATGCAACGTACAAGGGCAATATAGCACGGCTAATAAACCATTCTTGCATGCCAAATTGTTATGCAAGGATTATGAGTTTGGGTGATCAAGAGAGTCGGATCGTTCTCATTGCCAAGACGAATGTTTCTGCTGGCGAAGAATTAACGTATGATTACTTATTCGATCCAGATGAGCAGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCTCCAATTGTAGGAAATTTATGAACTAG 2763 0.4253 MAPRDGGGDGTRPPLLRSTRGRHQSLPSRFNDSVLDSWKNQGVKVEDTDSSFEDDADEEKKKKGDNYCALEVNIEMEKNGFVKTESNSSVILCLVLKVVWSRRLKLLGMVVRRKQVYRPEDFALGDIVLAKCGKRYPAWPAVVIDPILQAPKSVLSCCVLGALCVMFFGFSKNGTQRDYAWVKQGMIFPFSKFMERFQGQTQLYKSKPSDFCMALEEAMLAVDGLLNSQLEVEEVTYVNAYPYGYLEPPAMPVDDEYHCEDQDTISCAGCYLMLPCKTMKKIKDPSGASQFYCKHCFKLRKSKQYCGICKKIWHHSHGGNWVCCDRCNVWVHAECDKISIELFKDLENTDYYCPACKGNFNKKVPIPKTSKSKKKYNVEDRLVENSQKSIVPETVTVVCNDMEGLYFPKLHLIMCKCSSCGSRKHTPSEWERHTGSRAKKWKHSVKVKSMMLPLEKWITENISQDGVPQQLDQQQVLSFLQENYEPVHAKWTTERCAVCRWVEDWEDKKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERDCCLCPVKGGALKPTDVEMLWVHVTCAWFQPQVVFQNHEAMEPAVGILRIPPNTFVKVEL*AKKVILAFVHTHTHRCASRAGYSTELHSVEKNGTQITKKLIYCAVHRVPNPESVLVVHTPGVFSPRASLENHRRCFRGSRLVSSKNVELIQSSNSEGDKIEPFSAARCHVYCRSLNKKAEIPIIHLLKGPGHHSLSAITQLNSYKDSEDSKVFTSFKERLHHLQKMEKLRVCFGKSGIHGWGLFARRDIQEGEMVVEYRIERVRRSVADLREVKYRAEGKDCYLFKISEDVVIDATYKGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDEQDELKVPCLCKASNCRKFMN* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2769 919 Pfam PWWP domain 125 221 IPR000313 -
Ahy3g2769 919 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 919 IPR025780 -
Ahy3g2769 919 SUPERFAMILY SET domain 764 919 IPR046341 -
Ahy3g2769 919 PANTHER PHD FINGER PROTEINS 73 919 - -
Ahy3g2769 919 SUPERFAMILY FYVE/PHD zinc finger 303 365 IPR011011 -
Ahy3g2769 919 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 363 IPR013083 -
Ahy3g2769 919 CDD PHD_ATX3_4_5_like 495 541 IPR042011 -
Ahy3g2769 919 SUPERFAMILY SAND domain-like 393 453 IPR010919 -
Ahy3g2769 919 MobiDBLite consensus disorder prediction 1 33 - -
Ahy3g2769 919 Gene3D - 109 231 - -
Ahy3g2769 919 Pfam PHD-zinc-finger like domain 549 651 - -
Ahy3g2769 919 SMART PHD_3 305 357 IPR001965 -
Ahy3g2769 919 SMART PHD_3 495 542 IPR001965 -
Ahy3g2769 919 SUPERFAMILY Tudor/PWWP/MBT 116 229 - -
Ahy3g2769 919 ProSiteProfiles PWWP domain profile. 136 193 IPR000313 -
Ahy3g2769 919 SMART set_7 777 900 IPR001214 GO:0005515
Ahy3g2769 919 ProSiteProfiles SET domain profile. 777 894 IPR001214 GO:0005515
Ahy3g2769 919 Pfam SET domain 788 893 IPR001214 GO:0005515
Ahy3g2769 919 CDD SET_SETD1-like 766 915 - -
Ahy3g2769 919 Gene3D - 387 472 IPR010919 -
Ahy3g2769 919 ProSiteProfiles Extended PHD (ePHD) domain profile. 547 655 IPR034732 -
Ahy3g2769 919 CDD PHD_TCF19_like 306 356 - -
Ahy3g2769 919 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 484 546 IPR013083 -
Ahy3g2769 919 Pfam PHD-finger 305 357 IPR019787 -
Ahy3g2769 919 ProSiteProfiles Zinc finger PHD-type profile. 303 359 IPR019787 -
Ahy3g2769 919 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 73 919 - -
Ahy3g2769 919 ProSitePatterns Zinc finger PHD-type signature. 496 541 IPR019786 -
Ahy3g2769 919 Gene3D SET domain 698 919 IPR046341 -
Ahy3g2769 919 ProSiteProfiles Zinc finger PHD-type profile. 493 544 IPR019787 -
Ahy3g2769 919 SMART PWWP_4 122 191 IPR000313 -
Ahy3g2769 919 SMART PostSET_3 903 919 IPR003616 -
Ahy3g2769 919 ProSiteProfiles Post-SET domain profile. 903 919 IPR003616 -
Ahy3g2769 919 Pfam PHD-finger 509 542 - -
Ahy3g2769 919 SUPERFAMILY FYVE/PHD zinc finger 493 558 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2769 Ahy-Chr3 121681484 121688706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2769 269 330 EF-hand Containing Proteins AT5G28340 54.839 9.97e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy3g2769 SET 2.30E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2769 - - gmx:100793624 1363.21