Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2763 ATGTATGCTTCAACTTCCTTCACTTCACACATAGTTCATGACCTTGTCATACAATCTCACTCAAGAAGGTTACTCATGCTCCCAAATCCACTTGCTCATCACGATTCCTCACCACCTCCAACAAGCGATTTATACCTCGGAAACAGTTCTTTCGATGCCAACGTTGTCATGGTCCTCTCCGTCCTCCTATGCGCACTTATTTGCTCCTTAGGATTGAACGCAATCATAAGGTGTGCTTTGAGGTGTTCCGATTTGGTAATCAACGACTCATCATCGTCGTCAAATCCTAGCCCTTCATCATCATCAAGTAGTCGATTGGCCAACACGGGAATCAAGAAGAAAGCTTTGAAGACTTTTCCGATAATCACATACGAGTCAACTGAGTTAAACAAAGTACCTGGTTTGGACACCGAGTGTGTGATATGCCTCTCGGACTTCACAAATGGTGAAAAGTTGCGCATTCTGCCAAAATGCAACCATGGCTTCCATGTTAGCTGCATTGACAAGTGGCTCACTTCTCATTCATCTTGCCCCAAGTGCAGACACTGCCTAATTCACACGTGCCAAAAGATTGTTGGCGGAACTACTCATCATCCTCCTCCTCTTCTACCTCAAACCATTATAAGGATTGAACCACTGGACCCAGAAACCATGAGTAACAGAGCAATCAGAAGTTCAAAACCATATGATACAAATTTGCAAATTTGTAAATTTTCAACCATCAGCAACCAGCAAATTCAAGAGTACAAGACAGATCTATCAACAACAGGAAATTACAATTTACAAAACATTCAGAACCAAACTTCAAACCAAGACCGAAGAAGAAGAATTGAAGAAAAATGGAACAAAAATTGA 855 0.4164 MYASTSFTSHIVHDLVIQSHSRRLLMLPNPLAHHDSSPPPTSDLYLGNSSFDANVVMVLSVLLCALICSLGLNAIIRCALRCSDLVINDSSSSSNPSPSSSSSSRLANTGIKKKALKTFPIITYESTELNKVPGLDTECVICLSDFTNGEKLRILPKCNHGFHVSCIDKWLTSHSSCPKCRHCLIHTCQKIVGGTTHHPPPLLPQTIIRIEPLDPETMSNRAIRSSKPYDTNLQICKFSTISNQQIQEYKTDLSTTGNYNLQNIQNQTSNQDRRRRIEEKWNKN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2763 284 SMART ring_2 139 180 IPR001841 -
Ahy3g2763 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 185 IPR013083 -
Ahy3g2763 284 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 219 - -
Ahy3g2763 284 CDD RING-H2_PA-TM-RING 138 181 - -
Ahy3g2763 284 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
Ahy3g2763 284 SUPERFAMILY RING/U-box 132 186 - -
Ahy3g2763 284 Pfam Ring finger domain 138 181 IPR001841 -
Ahy3g2763 284 PANTHER RING-H2 FINGER PROTEIN ATL78 1 219 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2763 Ahy-Chr3 121498564 121502833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2763 23 185 C3H Transcription Factor Family AT3G10910 47.561 5.01e-45 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3096 13 124822159 124823171 Ahy3g2763 3 121498564 121502833 hybridization
Ahy3g2763 3 121498564 121502833 Ahy20g1975 20 111061401 111062461 PCT
Ahy3g2763 3 121498564 121502833 Ahy10g1538 10 89465686 89466709 PCT
Ahy20g1975 20 111061401 111062461 Ahy3g2763 3 121498564 121502833 PCT
Ahy10g1538 10 89465686 89466709 Ahy3g2763 3 121498564 121502833 PCT