Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2760 ATGGAGGGGATCCAGTGGCCACCATTGATGATGGACCTTGCAATGAGGAAGAACACTTGTCTTAGAGTAACAGCTGTTGTTGCAGATCAGCAAAGTGTAGCATATGTCCAGCAAACAGGAAGAAGGCTAAAAGAGTTTGCAGATTCTATTGATTTTCCTTTCGCTTTTGATCAGATAGTGATGGTTGGGGAGGAAGATCTTCAAAGAGTTGAACTTGGTCATACAGTTATAGTCAACTGTATGATACACCAATGGATGCCGAACAGAAGCTTCCCATTGATCAAAACATTCCTTGATGGTGTAAGCAAGTTATCACCAAGGCTTGTTGTTTTGGTGGAGGAAGAACTTTTCAACTTTGCTAGGCTAAAATCCATGTCGTTTGTGGAGTTCTTCTGTGAGGCTTTGCACCACTACACTGCACTTAGTGATTCACTTGCTAGTAGTTTGTTGGGTAGGCAGAAGATGGAGCTAACCATGATAGAGAAAGAAGTTATGGGGCAAAGGATTTTGGACAGTGTGAAGCAGTTTCCATGTGAGAGAGAAGAAAGAATGGTGTGGGAAGAAGGGTTTTACTCCTTGAAGAGGTTCAAGCGTGTTGCTATGAGTAGCTGTAATGTTTCACAGGCTAAGTTCTTGGTGAGCTTGTTTGGTGGAGGCTATTGGGTGCAATCTCAGGACTCTAGGTTGGCTCTATGTTGGAAGTCAAGGCCTTTGACATCTGCTTCAACCTGGGTACCTGCAACTTATTGA 750 0.4333 MEGIQWPPLMMDLAMRKNTCLRVTAVVADQQSVAYVQQTGRRLKEFADSIDFPFAFDQIVMVGEEDLQRVELGHTVIVNCMIHQWMPNRSFPLIKTFLDGVSKLSPRLVVLVEEELFNFARLKSMSFVEFFCEALHHYTALSDSLASSLLGRQKMELTMIEKEVMGQRILDSVKQFPCEREERMVWEEGFYSLKRFKRVAMSSCNVSQAKFLVSLFGGGYWVQSQDSRLALCWKSRPLTSASTWVPATY* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2760 249 PANTHER OS12G0162700 PROTEIN 1 245 - -
Ahy3g2760 249 Pfam GRAS domain family 1 244 IPR005202 -
Ahy3g2760 249 ProSiteProfiles GRAS family profile. 1 245 IPR005202 -
Ahy3g2760 249 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 245 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2760 Ahy-Chr3 121387000 121387749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2760 2 244 GRAS Transcription Factor Family AT1G55580 35.926 1.84e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy3g2760 GRAS 2.50E-47 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2760 - - ahf:112791141 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3094 13 124753374 124754807 Ahy3g2760 3 121387000 121387749 hybridization