Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2741 ATGGAAAAAGGAAAATTAATTCCGGGATTTCATTTCAATCCCACTGATGTAGAGCTTCTAAAGTATTTTTTGAAGAGAAAAGTGACAGGCAAAAAGCTACCCAATGTGATTGCTGAGATTAACGTTTATCAGTATTGTCCCTGGGATCTCCAAGGTAAGTCACATCTGAAAAGTGGGGATTTGGAGTGGTACTTCTTCTGTGCAAGAGGAAAAAATTATGGAATTGGGTCGAAGACGAACCGTGCTATAAAGAATGGGTACTGGAAAGCTACTGGTATGGACAAAGCTATTGTTCAGCATGACAAGCAAACAGTGGGGATGATGAAAACCCTTGTTTTCCACACTGGGAAACCGCCTCATGGGACCCGAACTGATTGGGTTATGCATGAGTATAGGCTTCAAGATAAAGACCTTACTGATAAAGGAATTGCTCAGGACTCTTATGTTATCTGTAAGGTGTTCCGAAAGGAGGGTCATGGCCCACGGAGCGGTGCACAATATAGGAAACCATTTAATGAAGAAGATTGGGATGATGATGATGACGATGATGATGATCATCACGTTGTTGAGGAGGGGGGAACCCCTTCAACTGCTTTGGTTGCGCCGGTTTCCATTCAGTCTATGACATTGGATGGCTCTTCTTACATGAAGGCAACCTCTGTTTCATGTGAGTCGGGACCTGTGGCTACTTCTCCTGTCCCATCAACTCCTTCTTCAGATGCAAGCATTCACACGGTTAATAATTCAACAGTGACTGATCTCTCCAAAGACGAAAAAACAGTACCTAAGGAAAATATTGCTGCCGGTGACCTCTTGAGTAAGTTTTTTGAGGGTTTGGAAGACCTCGAGTCTGAATACACTCCAAATGGAATGGGCTTGGATGACTTCGCCCCAAATGGAATAAACTATGATGACTTGGGGCACTTGGATTTGATTGATTGCAATTTCCTCTAG 954 0.4319 MEKGKLIPGFHFNPTDVELLKYFLKRKVTGKKLPNVIAEINVYQYCPWDLQGKSHLKSGDLEWYFFCARGKNYGIGSKTNRAIKNGYWKATGMDKAIVQHDKQTVGMMKTLVFHTGKPPHGTRTDWVMHEYRLQDKDLTDKGIAQDSYVICKVFRKEGHGPRSGAQYRKPFNEEDWDDDDDDDDDHHVVEEGGTPSTALVAPVSIQSMTLDGSSYMKATSVSCESGPVATSPVPSTPSSDASIHTVNNSTVTDLSKDEKTVPKENIAAGDLLSKFFEGLEDLESEYTPNGMGLDDFAPNGINYDDLGHLDLIDCNFL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2741 317 MobiDBLite consensus disorder prediction 159 195 - -
Ahy3g2741 317 PANTHER PLANT NAC DOMAIN PROTEIN 1 229 - -
Ahy3g2741 317 MobiDBLite consensus disorder prediction 159 173 - -
Ahy3g2741 317 MobiDBLite consensus disorder prediction 223 244 - -
Ahy3g2741 317 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Ahy3g2741 317 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Ahy3g2741 317 PANTHER PLANT NAC DOMAIN PROTEIN 240 301 - -
Ahy3g2741 317 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Ahy3g2741 317 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Ahy3g2741 317 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 229 - -
Ahy3g2741 317 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 240 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2741 Ahy-Chr3 120647141 120650096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2741 1 273 NAC Transcription Factor Family AT5G64060 43.066 4.88e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g2741 NAM 2.30E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2741 - - adu:107480257 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3072 13 123467001 123472897 Ahy3g2741 3 120647141 120650096 hybridization
Ahy3g2741 3 120647141 120650096 Ahy20g2013 20 114022081 114025101 PCT
Ahy3g2741 3 120647141 120650096 Ahy10g1575 10 91687327 91690405 PCT
Ahy20g2013 20 114022081 114025101 Ahy3g2741 3 120647141 120650096 PCT
Ahy10g1575 10 91687327 91690405 Ahy3g2741 3 120647141 120650096 PCT