Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2733 ATGCCGGCGTGGTGGAGTAGAAAATCCTGCAAGAACAAACAGCAGAATCAGGGTGAGGTTGAAGATGAGGAAGAGACACGTGGCAGGCAGAAATTCAATCTGATAGGATCGCCGATTAGCATTATCAGCAGCAGGAAGAAAGGCAAGGACAAGAACAAGAACAACAAGAGCTTCGATGAGCTTATCGCCTCTCGCAACTCACCGAGGACAAGCAAGGAATTCGCCAGCGTCGACGGTAACGACAATAACAGAGACCGAGACAGAGGGCTTCCGTTGCCTCGCCCTACGGTTTCGGCCAATCACAGCTTCAACAACGATCAGGGCCTCGTCTTTGGATCTACTTCGCTATCTGGTTCCAGCGTCAGCTCCTCAACCTCTTACGATGACCACCCTATATCTCCTCAATTCATTAACAACAGAGGACAAGGTGACATCAAATTCCATGTGAGGCCAAAGAGCCCAGGTGCCGGGTCAAGGGGGCCGACAAGCCCTACATCGCCACTTCATCAGAGGATTTTGAGTCTCGACTCTCCTACAGGCAAGCAAGACGATGGAAAAAGTGAATGTCACCCCTTGCCTCTTCCCCCTGGCTCTCCTACTAGTCCTTCCACCCTTTCCACCCCACGGGCAAATGGATCCTTAGAAAACAACGCCAGTAATCTGTCCAAGTGGAAGAAAGGAAAGCTTCTAGGAAGGGGAACTTTTGGGCATGTTTATCTTGGATTTAATAGTGAGAGTGGACAAATGTGTGCAATAAAGGAAGTCAGGGTTGTCTCTGATGATCCAACATCAAAAGAGTGCCTCAGACAACTTAATCAGGAGATAAACTTGCTTAATCAGCTTTCACATCCAAACATTGTTCAATACTATGGGAGTGAACTGGGTGAAGAAACACTATCAGTTTATTTGGAGTATGTTTCTGGTGGTTCTATCCATAAATTGCTACAGGAATATGGTTCATTTAAGGAGCCTGTCATTCAAAATTATACCAGGAAGATTGTATCTGGGCTTGCTTATTTGCATGCAAGAAATACAGTACACAGAGATATCAAAGGAGCTAACATACTTGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACTTATAAATTCTGCTGCCTCAGTACTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACCAATGGCTATGGTCTTCCAGTTGATATATGGAGCTTGGGGTGCACAATTCTTGAAATGGCAACGTCGAAGCCTCCATGGAATCAATATGAAGGGGTAGCTGCCATATTTAAAATTGGTAACAGCAAAGATATGCCTGAAATCCCTGAACATCTTTCAGATGATGCCAAAAGCTTCATTAAGCTATGTTTAAATAGGGACCCGTTAGCACGCCCAACAGCTCAAATGCTACTAGACCACCCCTTCATTCGTGACCAATCAGCAACAAAAGCTGTAAATGTTAGCATAACCAGAGATGCTTTCCCCCGCATGTTAGATGGAAGCCGGACTCCGCCGCCTGTTTTGGAGCATCAATCCAATAGAACAAGTATAACGTCACTTGATGGAGATCATGCAACAAAGACAGCTCGAGCAGCTTCTCACGCATTAAGGAGCCCAAGAGACAACGCAAGAACAATCACATCTTTGCCAGTGTCTCCCTCTTCAAGTCCATTGAGACAATATGGGACAGCACAAAAGAGCGGTTTCTTTTCTCCTCCTCATCCAACTTACACAATGATGGGGCAAAATAATTTCAATTTGAGTGACACGTCGCCATATTCTGTGAGATCAAATGCAGCATTCACTCTCGATCCTTGGCATGAAACGTCTCGATACAAAGCCCAAACACCACTTGGTGGATCTCCAAGAATGAGATTCATTTGA 1896 0.4515 MPAWWSRKSCKNKQQNQGEVEDEEETRGRQKFNLIGSPISIISSRKKGKDKNKNNKSFDELIASRNSPRTSKEFASVDGNDNNRDRDRGLPLPRPTVSANHSFNNDQGLVFGSTSLSGSSVSSSTSYDDHPISPQFINNRGQGDIKFHVRPKSPGAGSRGPTSPTSPLHQRILSLDSPTGKQDDGKSECHPLPLPPGSPTSPSTLSTPRANGSLENNASNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDPTSKECLRQLNQEINLLNQLSHPNIVQYYGSELGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRKIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKLINSAASVLSFKGSPYWMAPEVVMNTNGYGLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSDDAKSFIKLCLNRDPLARPTAQMLLDHPFIRDQSATKAVNVSITRDAFPRMLDGSRTPPPVLEHQSNRTSITSLDGDHATKTARAASHALRSPRDNARTITSLPVSPSSSPLRQYGTAQKSGFFSPPHPTYTMMGQNNFNLSDTSPYSVRSNAAFTLDPWHETSRYKAQTPLGGSPRMRFI* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2733 631 MobiDBLite consensus disorder prediction 59 77 - -
Ahy3g2733 631 ProSiteProfiles Protein kinase domain profile. 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2733 631 PANTHER MAP KINASE KINASE KINASE 1 612 - -
Ahy3g2733 631 MobiDBLite consensus disorder prediction 14 30 - -
Ahy3g2733 631 MobiDBLite consensus disorder prediction 1 218 - -
Ahy3g2733 631 MobiDBLite consensus disorder prediction 544 568 - -
Ahy3g2733 631 Pfam Protein kinase domain 225 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2733 631 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 612 - -
Ahy3g2733 631 MobiDBLite consensus disorder prediction 158 177 - -
Ahy3g2733 631 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
Ahy3g2733 631 MobiDBLite consensus disorder prediction 510 527 - -
Ahy3g2733 631 Gene3D Transferase(Phosphotransferase) domain 1 221 502 - -
Ahy3g2733 631 SUPERFAMILY Protein kinase-like (PK-like) 221 562 IPR011009 -
Ahy3g2733 631 MobiDBLite consensus disorder prediction 203 218 - -
Ahy3g2733 631 SMART serkin_6 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2733 631 MobiDBLite consensus disorder prediction 44 58 - -
Ahy3g2733 631 CDD STKc_MEKK1_plant 223 480 - -
Ahy3g2733 631 MobiDBLite consensus disorder prediction 97 140 - -
Ahy3g2733 631 MobiDBLite consensus disorder prediction 500 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2733 Ahy-Chr3 120357133 120362361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2733 1 544 MAP Kinase Kinase Kinase AT1G53570 57.754 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy3g2733 Pkinase 7.00E-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2733 K04421 - gmx:100787064 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3060 13 122876501 122881742 Ahy3g2733 3 120357133 120362361 hybridization
Ahy3g2733 3 120357133 120362361 Ahy20g2017 20 114180592 114186355 PCT
Ahy3g2733 3 120357133 120362361 Ahy10g1581 10 91902941 91908117 PCT
Ahy20g2017 20 114180592 114186355 Ahy3g2733 3 120357133 120362361 PCT
Ahy10g1581 10 91902941 91908117 Ahy3g2733 3 120357133 120362361 PCT