Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2730 ATGGCTAGCACCTTCAACAATGTCAAGGACATTGATGCATCCCATGACAACTTGACCTATAGGATCAAGGTGCGTTTGATTAAGATTTGGACTCTATCTACGGCTGAGCAGAAATTTCAAAAGCCAATGCTGGAGCTGGTGGTCATGGATAATCAAGGAGATCGGATCCAATGTTCAATTCGAAACCCTCATAGGAGGTTATTTGAGGCCGACCTTACCGAAGGGAAAATATACACTATCTCCAATTTTTCAGTTGCTCAGAATGACCTCAAGTACAAAGCCACCAATCATGTTAGCAGAATATATTTTAAGAGAGATACCCAGCTTAGGGTGGTTCAGGATCCTCTATTCCTTACACATATTTTTTGCTTTGTGCCCAATGAAGTAATACTTAACCACACCAATGCTCAGTCCCATTTAATTGATTTAATTGGGCTCCTCACTGCTAAGGGTGACATTATTGAATTCACAAAGAATGGAAAGAAGTCCATTTACATTGTCATAGAACTTGATGACCTGAGAAGAAATGGTACCATTCGATGTACTTTGTGGGAAGAATTTGTAACTAAATTGGTAAAGCATATGGAAGAGACACCAACCTCAGAATATATACTTATTATACAATTTGCGAAGTTTAACCTATTTAAAGGTACAATGGGTATATCAAACACCAACTACAATTTCATTCTGCACATCAACGGTGATTTTCAAGAGGTCAAGGATTTTCGCAAGAGTGTCATAATATCAGGTGTACCTGCTGCAACTCAAGTTTCTCAAATACCGGGAGAGCCGACATATTCACTCGAAGAGGACCTACTTAACCATTCCATTTATAAGCCCATCTCCGAGCTGAAGGATTCAATTGAGAATGGCTCTTTGTCACTATTGGCACGGTTATATCCATTGATCCTAAGAATGGGTGGTGGTACAAGAGTTGCAAGCATTGCTTCCATTCTTTACAAGAAGCCGAGAACTCATACCACTGTGCTAGGTGTGAGACATACCCATCGTCTCACACTCCAAGGTTTAGCATAA 1035 0.401 MASTFNNVKDIDASHDNLTYRIKVRLIKIWTLSTAEQKFQKPMLELVVMDNQGDRIQCSIRNPHRRLFEADLTEGKIYTISNFSVAQNDLKYKATNHVSRIYFKRDTQLRVVQDPLFLTHIFCFVPNEVILNHTNAQSHLIDLIGLLTAKGDIIEFTKNGKKSIYIVIELDDLRRNGTIRCTLWEEFVTKLVKHMEETPTSEYILIIQFAKFNLFKGTMGISNTNYNFILHINGDFQEVKDFRKSVIISGVPAATQVSQIPGEPTYSLEEDLLNHSIYKPISELKDSIENGSLSLLARLYPLILRMGGGTRVASIASILYKKPRTHTTVLGVRHTHRLTLQGLA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2730 344 CDD RPA1_DBD_A_like 21 107 - -
Ahy3g2730 344 PANTHER REPLICATION FACTOR A 1, RFA1 18 249 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy3g2730 344 CDD RPA1_DBD_B_like 142 247 - -
Ahy3g2730 344 Gene3D - 118 250 IPR012340 -
Ahy3g2730 344 Pfam Domain of unknown function DUF223 45 135 IPR003871 -
Ahy3g2730 344 Gene3D - 5 114 IPR012340 -
Ahy3g2730 344 SUPERFAMILY Nucleic acid-binding proteins 5 115 IPR012340 -
Ahy3g2730 344 SUPERFAMILY Nucleic acid-binding proteins 137 246 IPR012340 -
Ahy3g2730 344 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 18 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2730 Ahy-Chr3 120209878 120213402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2730 71 243 Core DNA Replication Machinery Family AT2G06510 27.624 2.59e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2730 - - adu:107485133 649.432