Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2688 ATGAAGAGTGAATTGGAATTACCACCTGGATTCAGGTTCCACCCCACTGATGAGGAACTTGTGAATCACTACTTGTGCAAGAAATGTGCTTCACAGTCAATTGCTGTTCCTATCATCAAGGAGATCGATTTGTACAAGTTTGATCCATGGCACCTTCCAGAGATGGCTCTATACGGCGAGAAAGAGTGGTATTTCTTCTCTCCCAGGGACCGCAAATATCCGAACGGATCACGCCCAAACCGGGCTGCGGGTACAGGGTACTGGAAGGCCACAGGTGCCGATAAGCCCATTGGAAAGCCCAAGGCCCTGGCCATCAAGAAGGCACTGGTGTTTTACGCTGGCAAAGCCCCTAAAGGAGTGAAAACCAATTGGATCATGCATGAATATAGACTCGCTAATGTTGACAGATCCGCAGGCAACAAGAAAAATAACTTAAGGCTTGATGATTGGGTGCTATGCCGAATTTACAACAAGAAAGGAAAGATTGAGAAATACAACCATCTTGGGGCGGCGGATCACAAATCAGCATCTTCGTGGGAGGAGAATGAGAGGAAGCCGGAGGTGAAGGAGCGATTGCATATGGATACGTCGTCGGATTCGGTGGTATCGGCGGATGTGACGTGGGAGAGTAGGGAGGTGCAGAGCGAGCCAAAGTGGACTGACCTGCTTGACCAAGTCTTTGATTTCCAGTTAGGCAGTTTCGTTGATTTCTCATCGGCTGGAGATGACCCTTTTGCCCCCCAGCTCTCTCCTTGGCACCAGGACACGTTCATCACATTTTAA 783 0.4904 MKSELELPPGFRFHPTDEELVNHYLCKKCASQSIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGNKKNNLRLDDWVLCRIYNKKGKIEKYNHLGAADHKSASSWEENERKPEVKERLHMDTSSDSVVSADVTWESREVQSEPKWTDLLDQVFDFQLGSFVDFSSAGDDPFAPQLSPWHQDTFITF* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2688 260 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Ahy3g2688 260 PANTHER NAC TRANSCRIPTION FACTOR 56 1 231 - -
Ahy3g2688 260 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Ahy3g2688 260 MobiDBLite consensus disorder prediction 173 194 - -
Ahy3g2688 260 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Ahy3g2688 260 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Ahy3g2688 260 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2688 Ahy-Chr3 119220434 119221722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2688 1 260 NAC Transcription Factor Family AT5G08790 65.074 5.34e-116 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g2688 NAM 9.30E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2688 - - gmx:100170751 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3025 13 121867770 121869072 Ahy3g2688 3 119220434 119221722 hybridization