Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2646 ATGGCTTCGCCGTCTCCATCAATGGAAAGAAGGGTTGCCGGTGATGAAGATACCACTGGGGGCGAAGCAGACCATGGAGTTGGATTGGTTGAGGGCGTAGGCTTTGCGGGGTTGGAATCGTACGAGTACGATTTACAGGAAGATGAAACAGAAAACGACCATCCGATTGAGGGCGAACGCTCTGAAGGGATGGAGTCGGAGGAGAACGACTTTCAGGAAGACGATACAGAACACGACCGTCATGCAGAGGCCGATGTCGACAGTGGGGATGCGGTCGAATTGGAAGACGGTTTGGATGGCGCCGGAGGAATGTCTGAGAATTATGCGGAAGACGAGTTTTACGCCGTTGATTCCGGCGAGTCCATAGGTTGGATTGATTTTTTGAACTTGAGCGCGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTATCAGCAATATGCAAAGCACCATGGATTCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTTTGCCACCGACAAGGGTTCCAATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGAATGCCCTGCGAGGATGTTACTCCGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTTCTTTTCAGACGCGCATAACCACCACGTGCTTGAGTTGCGATTTTCTTCCATGCTCCCGGGCCATCAGAGGATGAGCGAAGCGGACATCCAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCGTAGATGCGGAATCGTGCTTGAGGTATCTCCGAGAGTGCAAGGCAAATGATCCCGCACTGTACTACAAGGAAGTCGTTGACGGTGACGGCGTGCTGCAACACTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCGTTTGATGCAACTTACAAGAAAAACGTTTACCTTTCACCTCTCGTAGTATTCTCCGGTGTGAATCACCACAACCAAACCGTTGTCTTTGCCGCTGCATTGGTGGCAGACGAGAAAGAAGAGACATATGTCTGGCTGCTTCAGCAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCCGGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACGAGCAACATTGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTCGGCGACTACGAGGTCCGAACATTTCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGAGTGGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGCTGGGCCACAGCACACATACGGGGAAAGTTCTTTGTCGGATTTCGAACAACATCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACGTCATTTCCATCGATGCTTGATGTTCGTCCGCGCAAAGGAGGTGGAGGCTGATTTCGAGTGCGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCGGCCGACAACTACACTCGTGCGATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATTCACACCGTCTCTCGATACGGCACTCCGGGGAAGGAGTGGCGTGTTGTTGCAACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTACCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGGAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCAAAGCACGGAGAAGTTCCAGTTTGCAAGAGACATAGCTGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACAGCAGTTTTCAACACGAGGGGCCACCTACGGAGGGCGGGAGACCCCCGGCGCGAAATCCACCCAGGCGCAGTACAAAGGGTAACGGTGGTCACGGTGGAAAGAAGACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGAGCGTCGCACAATGGAACCATTCAGCTCAGTTGCAGAAGACATGGATTCGATGGACACTGACATGGTCTATGATAACCTATCCGGCGATCTGTATGCGACCGCGGAGATTCCTTCGTTCGAATGCTCCGATAGTGACACGCAGGCCGGTTTTGCTAACAGCGACTTCGCTGGGGCAAAGACGTCCGGGCCAGTCATGTCTCTCGCCGATTGA 2619 0.5212 MASPSPSMERRVAGDEDTTGGEADHGVGLVEGVGFAGLESYEYDLQEDETENDHPIEGERSEGMESEENDFQEDDTEHDRHAEADVDSGDAVELEDGLDGAGGMSENYAEDEFYAVDSGESIGWIDFLNLSAEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGFQSPKFYSMPNRQKRPRAETRCECPARMLLRMDDESGRWHVAFFSDAHNHHVLELRFSSMLPGHQRMSEADIQQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGVDAESCLRYLRECKANDPALYYKEVVDGDGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVVFSGVNHHNQTVVFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFQRKWFEMVEKFGVADKRWVQDMYERRHSWATAHIRGKFFVGFRTTSRCEGLHAVISRYVKSRYSYTEFLRHFHRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAADNYTRAIFYLFVPILDRACAMRVVDSEDNGSYFIHTVSRYGTPGKEWRVVATSDTREVRCTCMRMECFGVPCEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVESMGVIWDSVQLTQHWCLMDWYRKVCKIACQSTEKFQFARDIAVLMLKHFENEDAGNSSFQHEGPPTEGGRPPARNPPRRSTKGNGGHGGKKTQRCRLCREVGHNRTTCPERRTMEPFSSVAEDMDSMDTDMVYDNLSGDLYATAEIPSFECSDSDTQAGFANSDFAGAKTSGPVMSLAD* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2646 872 Pfam MULE transposase domain 357 451 IPR018289 -
Ahy3g2646 872 SUPERFAMILY Retrovirus zinc finger-like domains 772 807 IPR036875 GO:0003676|GO:0008270
Ahy3g2646 872 MobiDBLite consensus disorder prediction 1 105 - -
Ahy3g2646 872 MobiDBLite consensus disorder prediction 747 787 - -
Ahy3g2646 872 PANTHER OS02G0262500 PROTEIN 135 730 - -
Ahy3g2646 872 ProSiteProfiles Zinc finger SWIM-type profile. 634 670 IPR007527 GO:0008270
Ahy3g2646 872 Pfam FAR1 DNA-binding domain 148 237 IPR004330 -
Ahy3g2646 872 MobiDBLite consensus disorder prediction 74 88 - -
Ahy3g2646 872 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 135 730 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2646 Ahy-Chr3 117687986 117690808 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g2646 MULE 2.30E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2646 - - ahf:112770447 1486.09