Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2642 ATGGGTAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGGAGCTTGGACCAAAGAGGAAGATGAGCGCCTCATCAACTACATCAAGCTTCATGGCGAAGGCTGTTGGAGATCCCTTCCCAAAGCTGCAGGGTTGCTTAGGTGTGGGAAGAGTTGCAGGCTGAGATGGATAAATTACCTAAGGCCTGATCTCAAGAGAGGCAACTTCACTGACGAAGAAGACGAGCTCATCATCAACCTCCACAGCTTACTCGGTAACAAATGGTCTCTAATAGCAGCGAGGTTACCGGGAAGAACCGATAATGAGATAAAGAACTACTGGAACACCCACATAAAGCGTAAACTTTATAGCCGTGGAATTGACCCTCAAACCCATCAACCACTCAACGCTGCACCCGCACCTTCCACCAAAACAATAACCCCACCACCACCAACAACAACAGTTCCACCTACGGCCACAAACAACAACGACAACAGCATCAATTTTCGTCTATTTGGTGTTGCTTGTGCCAAGAATAATAATACTGATGGAACAGACTACTACTCATCAGGAGGGGGTGATGAAGATTCAAACAGCAGCAGTGGCGTCACAACGGAGTTAGAAGCATATCCTAAACTCAACTTGGACCTCTCCTTAGGCCTTCCCTCTCCTCTTTCTTCCATAATCCACACACAAAACCCAAAACGACACCGTCAACAACTACAAGCTGCTTATTCCTTTTGTATGTGTCAAACTCTAGGGTTTCAAAAAAGTAATAACCAACCTTGTGCCTGCAAAGCCCAGCCTGGTGCTGCTACTGGAAGTGCTGGTGCTGCTTCGAATAATAGTAGTAATGATAATAATGTGTATAACAGATTTCAATTTACAAGCTAA 876 0.4509 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHQPLNAAPAPSTKTITPPPPTTTVPPTATNNNDNSINFRLFGVACAKNNNTDGTDYYSSGGGDEDSNSSSGVTTELEAYPKLNLDLSLGLPSPLSSIIHTQNPKRHRQQLQAAYSFCMCQTLGFQKSNNQPCACKAQPGAATGSAGAASNNSSNDNNVYNRFQFTS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2642 291 CDD SANT 69 112 IPR001005 -
Ahy3g2642 291 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Ahy3g2642 291 CDD SANT 16 61 IPR001005 -
Ahy3g2642 291 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy3g2642 291 PANTHER TRANSCRIPTION FACTOR MYB7 1 239 - -
Ahy3g2642 291 SMART sant 13 63 IPR001005 -
Ahy3g2642 291 SMART sant 66 114 IPR001005 -
Ahy3g2642 291 MobiDBLite consensus disorder prediction 123 154 - -
Ahy3g2642 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy3g2642 291 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 239 - -
Ahy3g2642 291 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy3g2642 291 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy3g2642 291 Gene3D - 14 66 - -
Ahy3g2642 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy3g2642 291 Gene3D - 69 134 - -
Ahy3g2642 291 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2642 Ahy-Chr3 117644117 117645650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2642 1 223 MYB Transcription Factor Family AT4G09460 58.874 9.30e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g2642 Myb_DNA-binding 4.10E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2642 K09422 - gmx:100808083 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2983 13 120314523 120316102 Ahy3g2642 3 117644117 117645650 hybridization
Ahy3g2642 3 117644117 117645650 Ahy18g2858 18 133264489 133266281 PCT
Ahy18g2858 18 133264489 133266281 Ahy3g2642 3 117644117 117645650 PCT