Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2619 ATGTATGTTGTGTTGGGAGATAGAAAGATGGGCCCTGACGCATTCACGTCCACCCTGTTCAAGTGGGATCCGCGCACCATCCTCCCAACTTGTTCTTCCTCACTGATGGAGGGGACCGGGGGACTGGAGGAGCTGTTCCATGCATACGGGGTGAGGTACTACACGGCGGCGAAGGTGGCAGAGCTAGGGTTCACAGCAAGGACGCTGGTGGACATGAAAGAGGAGGAGCTGGAGCACATGATGAACAGCCTTTCCCAGATCTTCCGTTGGGATCTGCTGGTTGGCGAGCGCTATGGCATCAAAGCTGCCGTCCGAGCTGAGCGTAGACGCATCCAAGACCATCATCAACTTCGAATTGATTCTCTCTCTCAAGAAGGGGTGCAACAACATAAAGAGGCGGTGGGGAGCACGTGGGACGTCAGGAAGAGGATGAGAAGCAGAAGCAAGATGATGAGCGATGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGAGACAGAGAGAGCACCCGTTCATAGTGACGGAGCCTGGGGAAGTGGCGCGTGGCAAGAAGAACGGCCTGGATTACCTATTCCATCTGTATGAGCAATGCCGTGATTTCTTGATCCAAGTCCAGCACATTGCCAAGGAACACGGTCAGAAATGCCCTACCAAGGTGACAAACGAAGTGTTTAGGTTCGCCAAGAAGGCAGGAGCTCATTGCATAAACAAGCCAAAGATGAGACACTACGTTCACTGTTACGCGCTTCACTGCCTCGACAAAGACACCTCCAATCAACTCAGGAGGCAGTTCAAGGAGACAGGCCAGAACGTTGGTGCATGGAGGCAGGCCTGCTACAACCCTCTCGTTGCCATTGCTGCCCTCCACCACCACGACATTGATTCCATCTTTAACTCTCATCCTTGCCTTTCCATCTGGTACGTTCCCACGAAGCTTCGCCAGCTTTGTCACGCCCACAGGAACAATTCAGCTTCCACTTCCACTTCCACCTCCACCCATCATCATCTTCTCTTCTAG 1014 0.5325 MYVVLGDRKMGPDAFTSTLFKWDPRTILPTCSSSLMEGTGGLEELFHAYGVRYYTAAKVAELGFTARTLVDMKEEELEHMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIQDHHQLRIDSLSQEGVQQHKEAVGSTWDVRKRMRSRSKMMSDEEEEEEEEEERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQHIAKEHGQKCPTKVTNEVFRFAKKAGAHCINKPKMRHYVHCYALHCLDKDTSNQLRRQFKETGQNVGAWRQACYNPLVAIAALHHHDIDSIFNSHPCLSIWYVPTKLRQLCHAHRNNSASTSTSTSTHHHLLF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2619 337 PANTHER PROTEIN LEAFY 12 333 IPR002910 GO:0003677|GO:0006355
Ahy3g2619 337 Gene3D Protein LEAFY 153 323 IPR038276 -
Ahy3g2619 337 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 161 323 IPR035209 GO:0003677
Ahy3g2619 337 Pfam Floricaula / Leafy protein SAM domain 39 115 IPR035079 -
Ahy3g2619 337 MobiDBLite consensus disorder prediction 145 168 - -
Ahy3g2619 337 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2619 Ahy-Chr3 117031173 117032747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2619 10 321 Orphan Transcription Factor Family AT5G61850 54.592 4.81e-133 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Ahy3g2619 C_LFY_FLO 1.80E-97 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2619 - - adu:107480074 635.18