Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2584 ATGGATAGCAGCCAACATGAAAATGGTAGGCATAACGTGGACTACTACAGAGGAGCACATTCCCTGCATCAAGTAAAGGAGCCAAATGCATTAGTCATGAATAAAAAAATAAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTAGAACACGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGTGATTTGGCCCTTCGACAAAGGGATGAAGCACTTGCGCAAAGGGATAATGCCCTAAAGGAACGGGATAATGCCCTCACAGCACTTAAAAGTCAGAACATTTTCAAGTCAGGTGATGGAGCTCAACGTGGATCAAAGCGGATGCGCCAAACTGCATGCAGCCCAAAGGATATATCCAGAAGGGATGTCTCTCCAATGACGGCTAAAGTTTCTGAAGCTGTCAAATCTAATCAAGCTAAAAGAATGAAGGATGAAAATGTAATTAATTCTAAGGTATCAAAACCACATAGCAAGGCAAAGAAAATGGGCGAGGATTTAAATAGGCAGGCAGCTTCTGAAGGGATAAAGTTCAAATCTGAATGGGATATGCAGGATGTTGGCTTGAATTTGGTTGCATTTGATGAAACTATCATGCCTGTCCCAATATGCACCTGCACTGGAGTACCCCGGCAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCTTCTTGTTGTACCACGACGTTGTCAGTGTATCCACTGCCACAGCTTCCAAACAAGCGCCACGCCCGCATTGGGGGACGAAAGATGAGTGGGAGTGTCTTTACAAGATTGCTTAGTAGGTTTGCTTCGCAAGGTCATGACTTATCTACACCATTGGATCTTAAGAACTACTGGGCTAGACACGGAACAAATCGGTACATTACTATCAAGTAG 894 0.4474 MDSSQHENGRHNVDYYRGAHSLHQVKEPNALVMNKKIRSIMAERQAAILEHELEAAISEKNEALAARDLALRQRDEALAQRDNALKERDNALTALKSQNIFKSGDGAQRGSKRMRQTACSPKDISRRDVSPMTAKVSEAVKSNQAKRMKDENVINSKVSKPHSKAKKMGEDLNRQAASEGIKFKSEWDMQDVGLNLVAFDETIMPVPICTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFASQGHDLSTPLDLKNYWARHGTNRYITIK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2584 297 Coils Coil 46 87 - -
Ahy3g2584 297 Pfam GAGA binding protein-like family 25 297 IPR010409 -
Ahy3g2584 297 SMART GAGA_bind_2 1 297 IPR010409 -
Ahy3g2584 297 MobiDBLite consensus disorder prediction 102 134 - -
Ahy3g2584 297 PANTHER - 2 297 IPR010409 -
Ahy3g2584 297 PANTHER PROTEIN BASIC PENTACYSTEINE4 2 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2584 Ahy-Chr3 115339789 115342405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2584 2 297 BBR or BPC Transcription factor family AT2G21240 56.250 5.24e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Ahy3g2584 GAGA_bind 1.00E-92 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2584 - - gmx:100813103 447.203