Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2582 ATGGGCTGCGCGCTCCCAAAGCCGGCGCGATCCCGACCAAATCCCGCTGCGCCTCCAGAGAGGCAAGGGAACAACCAACCCAGCAATGTTCACCGCTACATTCCGACCCAACAGGGTTGGCCGCCGTGGTTGATGGAGGTTGTCGGCGACGCCATCCAAGACTGGACTCCTCGCCGCGCCAACACCTTCGAAAAGCTTTCTAAGATTGGGCAAGGGACTTATAGCAATGTGTACAAAGCCAGAGACCTAGTGAGTGGAAAGATAGTGGCTTTGAAGAAGGTGAGATTTGATCACTTAGAAGGAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTCCTGAAGAAGCTTGATCACCCGAATGTTGTGAAACTTGAAGGCTTGGTTACTTCAAGGATCTGTTCCAGTATCTACTTGGTGTTTGAGTACATGGACCATGATCTTGCTGGCCTTGTTGCTGGCCATGGTCTCAACTTCACTCAGCCTCAGATTAAATGCTATATGAAGCAATTACTATGTGGGCTTGAGCATTGCCACAGCAGAGGTGTATTACACCGTGATATAAAGGGCTCCAATCTGCTTATTGACAATCAAGGAATCCTTAAAATTGCTGATTTTGGACTCGCCGCTTTCTATGATTCCAAACAAACCCGTCCCATGACCAACAGAGTCGTCACTCTTTGGTATCGTCCGCCGGAGCTTCTTCTTGGAGCTACCTTCTATGGTGTTGGTATCGACCTCTGGAGTGCCGGATGCATCTTCGCGGAGCTACTTGCCGGAAAGCCTATCATGCCTGCCCGAACAGAGGTTGACCAACTGCACAAAATATTCAAGTTATGCGGCTCTCCATCAGAGGATTACTGGAAGAAATATAGATTGCAAAATGCTACACTCTATAAGCCACACCACCAATATAAAAGATGCATCCTGCAAACTTTCAAGGATTTCCCGTCTTCTTCATTACCTCTAATTGATACTCTTCTTGCAATAGATCCCGATCATCGCGGCACTACCTCTGCAGCTCTAAATAGTCAATTCTTTAACACCGAGCCCTATGCTTGTGAACCATCATGTTTACCAATGTATCCTCCTTGCAAAGAACTCGATGTAAAGCTAAGAGTCAAAGAAGCAAGAAGGCAGAAAGCTTTAAGCGGAAAAGCTGTTGCAGTTGATGCTGCAACAAGAGTTAGAGCGCTTGAGTGCGCTTTGGCCATTCCAGAGATCCAAACAAATTTAGATAGGTGGAGAGTTGTGACAAATGCAAATGCCAAAAGCAAGAGTGAGAAATTCCCACCTCCACATCAGGATGGAGCTGTTGGATATCCATTGAATGCATCAAACAGAGGAACTGTTTTATTTTGTGCCAGTGACACTTCCTTTGGCTCAAAAACTTCAAGAACTCTTGGAACTAGTATTGCTGCTGCTGCTGCTAGGCCTAGGCCTAATTCCAAAGGAAGGACATCAAACAAAGCAGATTCGAAGATGGTGTCATCTTGGAAATTTATGCGTGCATTCAAGCCAACAATTGTTGGCCTTTCATCTGATTTATTATTTAGAAGGAATTAA 1566 0.4585 MGCALPKPARSRPNPAAPPERQGNNQPSNVHRYIPTQQGWPPWLMEVVGDAIQDWTPRRANTFEKLSKIGQGTYSNVYKARDLVSGKIVALKKVRFDHLEGESVKFMAREILVLKKLDHPNVVKLEGLVTSRICSSIYLVFEYMDHDLAGLVAGHGLNFTQPQIKCYMKQLLCGLEHCHSRGVLHRDIKGSNLLIDNQGILKIADFGLAAFYDSKQTRPMTNRVVTLWYRPPELLLGATFYGVGIDLWSAGCIFAELLAGKPIMPARTEVDQLHKIFKLCGSPSEDYWKKYRLQNATLYKPHHQYKRCILQTFKDFPSSSLPLIDTLLAIDPDHRGTTSAALNSQFFNTEPYACEPSCLPMYPPCKELDVKLRVKEARRQKALSGKAVAVDAATRVRALECALAIPEIQTNLDRWRVVTNANAKSKSEKFPPPHQDGAVGYPLNASNRGTVLFCASDTSFGSKTSRTLGTSIAAAAARPRPNSKGRTSNKADSKMVSSWKFMRAFKPTIVGLSSDLLFRRN* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2582 521 Gene3D Phosphorylase Kinase; domain 1 49 145 - -
Ahy3g2582 521 MobiDBLite consensus disorder prediction 1 32 - -
Ahy3g2582 521 MobiDBLite consensus disorder prediction 471 492 - -
Ahy3g2582 521 CDD STKc_CDK9_like 63 347 - -
Ahy3g2582 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Ahy3g2582 521 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Ahy3g2582 521 Gene3D Transferase(Phosphotransferase) domain 1 146 387 - -
Ahy3g2582 521 ProSiteProfiles Protein kinase domain profile. 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2582 521 Pfam Protein kinase domain 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2582 521 SUPERFAMILY Protein kinase-like (PK-like) 56 352 IPR011009 -
Ahy3g2582 521 PANTHER CELL DIVISION PROTEIN KINASE 34 471 - -
Ahy3g2582 521 MobiDBLite consensus disorder prediction 18 32 - -
Ahy3g2582 521 SMART serkin_6 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2582 521 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 34 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2582 Ahy-Chr3 115324949 115327536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2582 55 381 Core Cell Cycle Gene Families AT5G10270 50.146 6.41e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy3g2582 Pkinase 9.80E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2582 K08819 - gmx:100789359 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2921 13 117613183 117615748 Ahy3g2582 3 115324949 115327536 hybridization