Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2567 ATGAACTTTGTGAAGAAGTGTAAGAGGGTGTGGGGAAGCAGCGAGAGAATGTGTTGTGGTGAAGAAGAGAAGAGTGGCAGTTATGGGAGATTAAAAGAGAATAAGAAGAAGGAGAAGAGGAAGGTGAAGAAGGTGGAAACCAGTGCTCCTCCACATGGTTGTTTCTGTGTGTACGTAGGAGAAGAAAAGCAAAGGTTTGTGATGAAGATAAAGCACGCGAACCATCCGTTATTCAAGGCCTTATTGGACGCTGCTGAAACCGAATACGGTTACAGAAATGGACCACTCTGCCTCCCTTGCGACGTTGACTTGTTCTGCGAGGCACTCGCTGAGATCCAGAACACTTCTTCTTCCGTCGGTTGTGCCTTTCATCACACTAACAAACACTACTCTTCTTCTTCATCTTCTTCTTCTTCTACTTTATCCGCATCGGTTTTCCAGAGTCCATTGTCCTATCATTCTAATCTCACTGATTACCAGCTTCTCGTATAG 492 0.4492 MNFVKKCKRVWGSSERMCCGEEEKSGSYGRLKENKKKEKRKVKKVETSAPPHGCFCVYVGEEKQRFVMKIKHANHPLFKALLDAAETEYGYRNGPLCLPCDVDLFCEALAEIQNTSSSVGCAFHHTNKHYSSSSSSSSSTLSASVFQSPLSYHSNLTDYQLLV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2567 163 Pfam Auxin responsive protein 35 110 IPR003676 GO:0009733
Ahy3g2567 163 Coils Coil 28 48 - -
Ahy3g2567 163 PANTHER SMALL AUXIN-UP RNA-RELATED 1 135 - -
Ahy3g2567 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2567 Ahy-Chr3 114479110 114479601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2567 20 118 Calmodulin-binding Proteins AT4G34750 39.048 2.65e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2567 K14488 - cam:101489648 137.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2911 13 116894099 116894893 Ahy3g2567 3 114479110 114479601 hybridization