Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2556 ATGGACAATAATCACCAAATTTTGTTCCCTAGCTCATCATCATCTGATTTTAAGGTTTCTAGTAGCAACAGTTTTCTTGATGTTAAGAAAGGAGATATTCTAAGAACTCCAAATAAAGAATCATCAAGCAAGAAAGGTGGGAAAGAGACGAAGAAGCAGCACAGATATGTTTTTCAAACAAGGAGTCATGTTGATATACTTGATGATGGCTACCGCTGGAGAAAATACGGGGAAAAGTCTGTCAAAAACAATAAATTCCCTAGGAGTTACTATAGGTGCTCATACAGAGGGTGCAATGTGAAGAAACAAATCCAACGGCATTCCATGGACGAGCAAATCGTGATCACAACCTATGAAGGGGTCCATATTCACCCTGTCGAGAAATCTACTGAAAGCTTCGAGCAGATCTTGAGAAACTTCCAATACACAACTAAGTCCAACCCTATTATGTATCTCCAACAACCTAATTAG 471 0.3885 MDNNHQILFPSSSSSDFKVSSSNSFLDVKKGDILRTPNKESSSKKGGKETKKQHRYVFQTRSHVDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHSMDEQIVITTYEGVHIHPVEKSTESFEQILRNFQYTTKSNPIMYLQQPN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2556 156 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 143 IPR044810 GO:0003700
Ahy3g2556 156 MobiDBLite consensus disorder prediction 32 54 - -
Ahy3g2556 156 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g2556 156 SMART WRKY_cls 67 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g2556 156 SUPERFAMILY WRKY DNA-binding domain 59 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g2556 156 Pfam WRKY DNA -binding domain 68 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g2556 156 ProSiteProfiles WRKY domain profile. 62 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g2556 156 MobiDBLite consensus disorder prediction 30 54 - -
Ahy3g2556 156 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 4 143 - -
Ahy3g2556 156 Gene3D WRKY domain 54 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2556 Ahy-Chr3 113839565 113841037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2556 55 141 WRKY Transcription Factor Family AT5G13080 75.862 5.88e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy3g2556 WRKY 5.70E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2556 - - gmx:100127378 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2898 13 116410818 116411611 Ahy3g2556 3 113839565 113841037 hybridization