Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2542 ATGTGGCGGTCGGCGATTTCAGAACGACAAAGAGCATTCTCGAAGCTTCTATTCGCCTTCACAGTGTCCTGCAACATGGGCGGCGGCCCTCGAACCTTCCCCGGCGGCGTCAACAAGTGGAAGTGGAAGCGCATGCACGAGAAGCGCGCCCGTGACAAAGAGAAGAGACTTCTCGAACATGAGAAACAGATCTATCAGGCTCGCATTCGCTCCCACATACGCTCCCACCTCGCACCCGACAACCCAACCGCCACCGCCGCCACCACCCACGGCCCTATCTCCCCCACTGACCACATTAGGGCCCTCGCCAACCGCTTCATGAAGGAAGGAGCTGAAGATCTCTGGAACAACGACGACGGTCCCCTAACGGTTTCTTCTTCTTCTTGTTCTTCTCCCACGCGGCAGCAAGGTTCGATTGAGGCGCCGGTGGATTTGCGGAAGCTGATACAAGAGAAACGGAACCCCAATTCAATGAATTCGAGTGGGAATTTCGGTCAGAGGAGGGGTTACCATTCTGTTTCTGAGGTGAATTCCGGTGTTGGTAGCAGTAAGAAACTTGCGCCTGCTGGGAGGAGAAGATTTTGGAGGAACGATAGTACTTCTTCGAGTGAGAGTGAATCCGAGGATGAGAACGATTCGAGGGTTAATAATTGGGATGTTAGGAAGATGGGTAGTAATGCGTCTTTGAGGAAGCATGATTTGAAGTGGGAGAGGAGAGTGATGCCAAAACCATATGATGAAGAGGCTGATTTTGCAGAACAGGTTGAGCTGATTAAGTATGAGATTAACAAGAGGAAGTTGAAACAGAAGGAAATGGAAGAGTACAGGGTTGAGGACCAAGAATCCATCCTAACCCAATCAAGATTTGATGAGTGCGGTATATCGCCATTGACAGTCAAGGCTCTCTCTTCAGCTGGTTATATCCACCTGACCCGGGTGCAAGAGGCAAGCCTTTCTGTTTGCCTTGAGGGTAAGGATGCTCTGGTCAAAGCTAAAACTGGCACGGGAAAAAGTGCAGCATTTTTGCTTCCTGCCATTGAAACAGTTTTGAAAGCTATGAATAGCAAGTCGCGTCAAAATGTGCCACCTATATTTGTTCTTATTCTCTGCCCTACCAGAGAACTTGCCAGTCAAATTGCTGCTGAAGCAAAGGCTTTGCTCAAGTATCAAGATGGCATTGGTGTACAAACTCTCGTAGGAGGGGTGCGATTTAAAGTTGACCAAAAGCGTCTTGAATCCGATCCATGCCAGATACTTGTTGCTACCCCTGGTAGGTTGCTAGATCATATTGAGAATAAGTCTGGACTATCTGTGCGATTGATGAGCTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTACTGGACCTTGGATTTCGAAAGGACGTAGAAAAGATTGTTGACTGTGTGCCTCGTCAAAGGCAATCCTTGATGTTTTCTGCAACCATCCCAAAGGAGGTCCGCCGTGTATCTCAACTTGTTTTGAAAAGGGAACATGCATACATTGATACAGTTGGTATGGGTTGTCTGGAAACTCCAGTGAAGGTCAAGCAATCTTTTCTTATTGCTCCACAGGAATCACATTTTCAAATAGTACACCATATTTTAAAGGAGCATGTCATGCAAACACCTGATTATAAGGTTATTATTTTCTGTGTTGCTGGAATGGTAACATCACTTATGTATCAACTTCTCCGTGAAATGAAAATGAACGTGAGGGAGCTACACTCTCGAAAACCCCAACTGTATCGAACTCGCATATCAGATGAGTTTCGGGAATCCAAACAACTGATTCTTGTCTCATCTGATGTTTCATCTCGTGGAATGAATTATCCCGATGTTACTTTAGTCATACAGGTGGGTATTCCTTCTGATCGTGAACAATATATACATCGTCTTGGAAGAACTGGACGGGAAGGCAAAGAAGGGGAAGGCATATTGTTGATTGCTCCATGGGAAGAATATTTTTTAGATGAAATCAAGGATCTTCCTCTAGAGAGATTCCCTTTTCCAGATATAGATCCACAGACAAAGCTTAAGATAGAACATTCCATGGGAAAGATAGACAGTGACGTCAAAGAAGCCGCATATCATGCTTGGCTGGGTTATTACAACTCAATTAGGGAAATTGGAAGGGAGAAGTCCACCATAGCTGAGCTTGCAAACCGGTTTTCTGCATCAATTGGTTTACAGAGGCCTCCTGCGCTCTTTCGAAAGACTGCTTTAAAGATGGGTTTGAAAGACATTCCTGGCATTAGAATTCGTCGATAA 2271 0.4575 MWRSAISERQRAFSKLLFAFTVSCNMGGGPRTFPGGVNKWKWKRMHEKRARDKEKRLLEHEKQIYQARIRSHIRSHLAPDNPTATAATTHGPISPTDHIRALANRFMKEGAEDLWNNDDGPLTVSSSSCSSPTRQQGSIEAPVDLRKLIQEKRNPNSMNSSGNFGQRRGYHSVSEVNSGVGSSKKLAPAGRRRFWRNDSTSSSESESEDENDSRVNNWDVRKMGSNASLRKHDLKWERRVMPKPYDEEADFAEQVELIKYEINKRKLKQKEMEEYRVEDQESILTQSRFDECGISPLTVKALSSAGYIHLTRVQEASLSVCLEGKDALVKAKTGTGKSAAFLLPAIETVLKAMNSKSRQNVPPIFVLILCPTRELASQIAAEAKALLKYQDGIGVQTLVGGVRFKVDQKRLESDPCQILVATPGRLLDHIENKSGLSVRLMSLQMLVLDEADHLLDLGFRKDVEKIVDCVPRQRQSLMFSATIPKEVRRVSQLVLKREHAYIDTVGMGCLETPVKVKQSFLIAPQESHFQIVHHILKEHVMQTPDYKVIIFCVAGMVTSLMYQLLREMKMNVRELHSRKPQLYRTRISDEFRESKQLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGEGILLIAPWEEYFLDEIKDLPLERFPFPDIDPQTKLKIEHSMGKIDSDVKEAAYHAWLGYYNSIREIGREKSTIAELANRFSASIGLQRPPALFRKTALKMGLKDIPGIRIRR* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2542 756 MobiDBLite consensus disorder prediction 112 219 - -
Ahy3g2542 756 Gene3D - 253 502 IPR027417 -
Ahy3g2542 756 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 535 681 IPR001650 -
Ahy3g2542 756 MobiDBLite consensus disorder prediction 152 181 - -
Ahy3g2542 756 Pfam DEAD/DEAH box helicase 311 489 IPR011545 GO:0003676|GO:0005524
Ahy3g2542 756 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 318 501 IPR014001 -
Ahy3g2542 756 SMART ultradead3 306 519 IPR014001 -
Ahy3g2542 756 MobiDBLite consensus disorder prediction 197 217 - -
Ahy3g2542 756 Pfam Helicase conserved C-terminal domain 535 639 IPR001650 -
Ahy3g2542 756 MobiDBLite consensus disorder prediction 119 138 - -
Ahy3g2542 756 Coils Coil 43 63 - -
Ahy3g2542 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 471 IPR027417 -
Ahy3g2542 756 Gene3D - 511 734 IPR027417 -
Ahy3g2542 756 SMART helicmild6 559 640 IPR001650 -
Ahy3g2542 756 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 287 315 IPR014014 GO:0003724
Ahy3g2542 756 CDD SF2_C_DEAD 516 649 - -
Ahy3g2542 756 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 29 755 - -
Ahy3g2542 756 PANTHER RNA HELICASE 29 755 - -
Ahy3g2542 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 657 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2542 Ahy-Chr3 112802208 112806197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2542 287 665 Eukaryotic Initiation Factors Gene Family AT3G19760 26.263 7.99e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2542 - - lang:109349967 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2879 13 115351785 115355454 Ahy3g2542 3 112802208 112806197 hybridization