Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2533 ATGAAGCTATACACTTCATTGTTGTTTCTGGGTTTGATTTCCACGCTGTCTTTTGTAGCTTCTGATACGGTGGCAAAAAATGAAGTTTCGGCGCTTCAAACCTTCAGAGAAGCTATCTTTGATGATCCACATCTTGTTTTGTCCAATTGGAATACCCTGGTTTCGGATCCTTGTGAGTGGAATGGTGTTTTGTGCAATGGACCTCGAGATCATGTCATCAAGCTAAACATATCAGGGTCAGCCTTAAGAGGGTTTCTTGCACCAGAATTGGGGCAAATCACCTACTTGCAAGAACTAATCTTGCACGGAAACAATCTTATTGGCACAATACCAAAAGAATTGGGCATGTTGAAATCTCTCAAGGTGTTGGACTTGGGGTTGAATCAGTTATCAGGACCGATTCCTCGAGAAATTGGAAATTTGACCCAAGCAGTGAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCCCCAGAGCTTGGAAATTTGAAATACCTTCAAGAACTTCGGTTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGCTGGTGGAAGTTCTGATTCAACTATGCATGAGATATCAAGCTTTCAAGGGAATTGCCTTCAGATTAAAGACATAAAGCAGCGGACTTCTGTACAATGTGCTGGTGCTTCACCTGCCCAGAGCCATCCAGTAATGAACCTAAAGCATCGAGCTGCTGAACATGTGTCGAAGCATCAAAGAGCATCAAAACCTTCCTGGCTTTTGGCTCTAGAGATAGCGACGGGAGTCATGGTTGGTTGTCTCTTTTTGATTGCTATTTTCACGGCGTATCAGAGGTTTAACAGCAAATCATCTATCATCATTCCTTGGAAAAAATCTTCAAGCGAGAAAGAGCATATGACAGTATATATAGAATCTGATGTGTTGAAAGATGTGACGAAGTATAGCAGACAAGATCTTGAAGTGGCCTGCGAAGACTTCAGCAACATAATTGGTTCTTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGACCCGAGATTGCTGTAATTTCCCTCTGCATTAAGGAAGAGCATTGGACGGGTTACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTGAATCATGAGAATACAGGAAAACTGCTAGGTTATTGTAGAGAGAGCAATCCTTTTACCAGGATGCTGGTTTTTGATTATGCTTCAAATGGGACACTCTATGAGCACCTACATTGCTATGAAGAAGGGTGCCAATTGTCTTGGACACGGCGTATGAAAGTTATTATAGGCATTGCTCGTGGACTCAAGTATTTGCACACAGAAATTGAACCACCATTCACTATCTCAGAGTTGAATTCCAATGCTGTATATCTTACAGAAGACTTTTCACCAAAGCTGGTCGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAGAAGAATTCTGGTTCCATTGGCAGCCAGGGCTCCATGTGCCTTCTTTCAAATTCCGTGGAGGCACGTCGTCTTGACACCAAAGGAAACATATACGGCGTTGCAGTACTTCTACTGGAAATAATCAGCGGACGACCTCCGTATTGCAAGGACAAAGGGTACTTGGTGGACTGGGCTAGGGAATATCTTGAGATACCGGAAATGATGTCAAGTGTGGTGGATCCAGAGTTAAAACATTACAGAGAAGACGACTTGAAAGTAATATGTGAGGTGGTATCTCAATGCATCAATGGTGACCCCAACGGCCGTCCGTCAATGCGGGAATTATGTAGCATTCTGGAGGGCAGAATTGACACTTCAATTAGCGTGGATCTCAAGGGATCATCTTTGGCTTGGGCTGAACTTGCCCTTTCATCTTAG 1863 0.4332 MKLYTSLLFLGLISTLSFVASDTVAKNEVSALQTFREAIFDDPHLVLSNWNTLVSDPCEWNGVLCNGPRDHVIKLNISGSALRGFLAPELGQITYLQELILHGNNLIGTIPKELGMLKSLKVLDLGLNQLSGPIPREIGNLTQAVKINLQSNGLTGRLPPELGNLKYLQELRLDRNKLQGPVPAGGSSDSTMHEISSFQGNCLQIKDIKQRTSVQCAGASPAQSHPVMNLKHRAAEHVSKHQRASKPSWLLALEIATGVMVGCLFLIAIFTAYQRFNSKSSIIIPWKKSSSEKEHMTVYIESDVLKDVTKYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESNPFTRMLVFDYASNGTLYEHLHCYEEGCQLSWTRRMKVIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGSIGSQGSMCLLSNSVEARRLDTKGNIYGVAVLLLEIISGRPPYCKDKGYLVDWAREYLEIPEMMSSVVDPELKHYREDDLKVICEVVSQCINGDPNGRPSMRELCSILEGRIDTSISVDLKGSSLAWAELALSS* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2533 620 Gene3D Transferase(Phosphotransferase) domain 1 403 606 - -
Ahy3g2533 620 ProSiteProfiles Protein kinase domain profile. 321 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2533 620 Gene3D Phosphorylase Kinase; domain 1 283 402 - -
Ahy3g2533 620 SUPERFAMILY L domain-like 27 199 - -
Ahy3g2533 620 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 196 620 - -
Ahy3g2533 620 SUPERFAMILY Protein kinase-like (PK-like) 302 595 IPR011009 -
Ahy3g2533 620 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Ahy3g2533 620 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Ahy3g2533 620 Gene3D Ribonuclease Inhibitor 24 215 IPR032675 -
Ahy3g2533 620 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 191 - -
Ahy3g2533 620 PANTHER PROTEIN MALE DISCOVERER 2 5 191 - -
Ahy3g2533 620 PANTHER PROTEIN MALE DISCOVERER 2 196 620 - -
Ahy3g2533 620 Pfam Protein tyrosine and serine/threonine kinase 325 593 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2533 Ahy-Chr3 112342949 112347773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2533 42 599 Receptor kinase-like Gene Family AT5G45780 29.649 6.86e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Ahy3g2533 PK_Tyr_Ser-Thr 5.70E-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2533 - - gmx:100779744 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2869 13 114848650 114853687 Ahy3g2533 3 112342949 112347773 hybridization
Ahy5g1597 5 42027794 42032140 Ahy3g2533 3 112342949 112347773 PCT