Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2524 ATGTTGTTGGCCCTTGATGAGCAAAACCACCAACATACTGGTGCATCCTCCAATCAGATCAATAGTTTGCCGGAGTCCACCATCCAGAATGACAACTTCGCAGAGGCCTGTGCAATATTCCTTGAGACCCCAGGCAAGGGTGAAATTATTCGCCATCTTCCCTGTTTGCACAAATTTCACAAAGATTGTATTGATCCTTGGCTCCATAGGAAAACATCATGCCCGGTGTGCAAGTCATCTATCACCTAA 249 0.4578 MLLALDEQNHQHTGASSNQINSLPESTIQNDNFAEACAIFLETPGKGEIIRHLPCLHKFHKDCIDPWLHRKTSCPVCKSSIT* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2524 82 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 80 - -
Ahy3g2524 82 PANTHER - 1 80 - -
Ahy3g2524 82 SMART ring_2 37 77 IPR001841 -
Ahy3g2524 82 MobiDBLite consensus disorder prediction 9 23 - -
Ahy3g2524 82 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 82 IPR013083 -
Ahy3g2524 82 SUPERFAMILY RING/U-box 28 81 - -
Ahy3g2524 82 ProSiteProfiles Zinc finger RING-type profile. 37 78 IPR001841 -
Ahy3g2524 82 MobiDBLite consensus disorder prediction 1 23 - -
Ahy3g2524 82 Pfam RING-H2 zinc finger domain 31 78 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2524 Ahy-Chr3 111775302 111776483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2524 1 82 C3H Transcription Factor Family AT1G04790 74.390 7.21e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2524 - - gmx:100789823 155.606