Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2504 ATGTTGACGGAGAACTTCAAAGAACAGCTTGCTTTGTCTGTTAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTCTACTTCATCTACCCAACCCGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAACTGTAGAAGCCAGCCCTCAAACCAAAAGGCCTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGGTACTATTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGGTTACCAGGAAAGGCTCTTGCAAAAGGTGAACCAATTTGGCTGTGTGATGCTCCTTCTAGTGATTGTAGAGATTTTAGTCGCTGTCTTCTGGCTAAGAGTGCATCCATTCAGACAGTGGTGTGCTTTCCTTTTATGGATGGGGTCATTGAGCTGGGTACAACTGATTATGTCTCAGAAGATCTCAGTCTCATTCAACAGATCAGAACTTCCTTGGATATTCTTGATGTCGGTGTTCATAATGTACATGGAGCATTTAATGCGAAACAATCTCAAGAAGTAGGAGGTGCATTAATCAGCATAACTTCTCCTAATAACAGTTCAAATGCATTTCAAGCCAATCAACCACCAGATGAAACATTCATGGTTGAAAGGATAAATAATGGCACCTCTCAAGTCCAAAGTTGGCAAATTATGGATGATGAATTGAGCAATGCTGTTCATAATTCTAGTGACTGCGTATCTCAAACTCTTCACAGTCCTGAGAACGTTGCTTCTCTTCCAAAGGGTGAAAACCTCACTGATAGTGCCAAAGACCTTCAAAAGTGCAATAACTCAAAAATGACATTAGTTGATCCTCGAAGCGATGATTGGCATTATCAGATGGTTCTTTCTACCCTTCTAAAAAGCTCAGACCAGTTAATCATGGGGATGCATTTTCAAAATTTTCATCAGGAATCAAGCTTTACAAGTTGGAAGAAAGCTGGGTCAGTGAGCTACCAAAGGCCAAGAACTGGAGGAAGCTCACAAGCTTTATTGAAGAAGGTATTGTTTGAAGTTCCTCGGATGCACTTGGATGGGATACTTGAGTATCAAGAAGAGAATGACTTTAAGGAAGCAGTGAGAACAGAAGCTGATGAAAATGGCATGAACCATGTTTTGTCAGAGAGAAGGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAGATCAATGGTCCCTTCAATTACTAAGGATGACAAAGTTTCGATACTAGATGATGCAATAGAATACCTTAGAAAGCTTGAAAAAAGGATAAAAGAGTTGGAAGCTCATAAGGATCTAACAGACAGAGAGGCTAGAACTAAAAGATCACCTCAAGATATGGTGGAGAGGACTTCTGATAATTATTTTAACAAAACGGATAACGGCAATAAATCGATGGCGAAAAAGAGGAAGTCTCGGGACATAGATGACACAAGGCCAGAGATTAATTCAGAATCTTTACTAAAAGGAAGTTCTACTAATGATGTTGCTGTTAACATCAATGAGAATAATGAAGTTGTGATTGAAATGAAATGCCCTTCAAGAGCAGGAATGTTTCTAAAAATTATGGAAGCAGTTAGCAGTCTCAGATTGAATTTTCATTCAGTTCAGTCCAGCGAAGTTGATGGGAATCTTTATTTTACCCTTAAATCTAAGCTCACAGGGCCAACTATTGTATCAGCAAAAAGGATCAAACAAACACTACAAAATGTGGCTTTCAAGTGTTGA 1827 0.4007 MLTENFKEQLALSVRSIQWSYAIFWSTSSTQPGVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSLKTVEASPQTKRPSAALSPEDLTDTEWYYLVCMSFVFNIGQGLPGKALAKGEPIWLCDAPSSDCRDFSRCLLAKSASIQTVVCFPFMDGVIELGTTDYVSEDLSLIQQIRTSLDILDVGVHNVHGAFNAKQSQEVGGALISITSPNNSSNAFQANQPPDETFMVERINNGTSQVQSWQIMDDELSNAVHNSSDCVSQTLHSPENVASLPKGENLTDSAKDLQKCNNSKMTLVDPRSDDWHYQMVLSTLLKSSDQLIMGMHFQNFHQESSFTSWKKAGSVSYQRPRTGGSSQALLKKVLFEVPRMHLDGILEYQEENDFKEAVRTEADENGMNHVLSERRRRAKLNERFLTLRSMVPSITKDDKVSILDDAIEYLRKLEKRIKELEAHKDLTDREARTKRSPQDMVERTSDNYFNKTDNGNKSMAKKRKSRDIDDTRPEINSESLLKGSSTNDVAVNINENNEVVIEMKCPSRAGMFLKIMEAVSSLRLNFHSVQSSEVDGNLYFTLKSKLTGPTIVSAKRIKQTLQNVAFKC* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2504 608 PANTHER TRANSCRIPTION FACTOR EGL1 5 604 - -
Ahy3g2504 608 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 187 IPR025610 -
Ahy3g2504 608 Gene3D - 101 172 IPR029016 -
Ahy3g2504 608 PANTHER TRANSCRIPTION FACTOR TT8 5 604 - -
Ahy3g2504 608 MobiDBLite consensus disorder prediction 468 521 - -
Ahy3g2504 608 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 404 453 IPR011598 GO:0046983
Ahy3g2504 608 MobiDBLite consensus disorder prediction 496 516 - -
Ahy3g2504 608 SMART finulus 410 459 IPR011598 GO:0046983
Ahy3g2504 608 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 407 470 IPR036638 GO:0046983
Ahy3g2504 608 Coils Coil 443 470 - -
Ahy3g2504 608 Pfam Helix-loop-helix DNA-binding domain 408 454 IPR011598 GO:0046983
Ahy3g2504 608 Gene3D - 396 471 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2504 Ahy-Chr3 109908620 109912419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2504 2 608 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.077 2.95e-180 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g2504 bHLH-MYC_N 3.50E-51 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2504 - - ahf:112732736 1166.76