Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2496 ATGGTCAGAATTAGATGGACACTCAGCATTTGGTTAACAACTATTACTGCCGCTAAGTTCCTCCTCCAGCCCAGGTTATCTTCCTCCCCTTCCCCTCCCCTTTCTCCTTCGTCGCAATCGCACCTTCTTCCTCCCCTTTCCCTACATCGCAATCGCACCCTCTTCCTCTCCTTCCCCTCCGTCGCAATTGCACCGATTGCCGTGGATGAAGATACCACTAGGGGCGTGCGTGTTGCCGAGGAAGCACAAATGCTCGACGGAGCAGACTACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCAAGGATGGAGTCGGATGAGTATGACTTTCAGGAATATGAAACAGAACACGACCATCATACAGAGACCAATGTCGACAATGGGGATGCAGTTGAATTGGAAGACAATTTAGACGGCGTCGGAGGAATGTCTGACAATTATTCGGATGATGACTCGTATGCCGTTGATTCCGACGAATCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTCTCCGCTTTAATTTTGCATACGTTAACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTTGGTGCGAGACGTTTCAGAAGCGAAAAACGTGGTGAAGTAAGGATACGACAGGAGTTCGTGTGCCACCGACCCCTGAAGTTCTATTCGATGCCTAACCGGCAAAAGAGGTCTAGGGCTGAGACACGGTGTGGATGCCTTGCAAGGATGCTACTTTGCATGGACGATGAATCAGGCCATTGGCACGTTGCGTACTTTTCAGACGTGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAGGATGAGCGAAGCGGATATCGAGCAGATGAACGACATGCGCAAAGGGGGCATAGGCATCTCGCAAATCCATGATTTTATGGCGAGTCTAGCTGACATGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAAAGCGAAGCAACAAAGGGAGGGTGGCCTAGATGCGAAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGAAAAATGATCCAACATTGTACTACAAGGAAGTCGTTGACGGAGAGGACGTGTTACAACATTTGTTTTGGTGTGACAGCACAAGCCAAATTAATTACCAGGTATTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACGTATACCTTTCACCTCTTGTAGTATTCTCCGGTGTAAATCACTACAACCAAACGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGAAAATTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCAACGGTGATAGGGAAATAAAGTCTGTGATCGAGCAAGTTTTTCCAGAGGCTCACCATTGA 1431 0.478 MVRIRWTLSIWLTTITAAKFLLQPRLSSSPSPPLSPSSQSHLLPPLSLHRNRTLFLSFPSVAIAPIAVDEDTTRGVRVAEEAQMLDGADYGVGSFEGEGSARMESDEYDFQEYETEHDHHTETNVDNGDAVELEDNLDGVGGMSDNYSDDDSYAVDSDESIGWIDFLNLSEEDVLRFNFAYVNIAFEFYQQYAKHHGFGARRFRSEKRGEVRIRQEFVCHRPLKFYSMPNRQKRSRAETRCGCLARMLLCMDDESGHWHVAYFSDVHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGISQIHDFMASLADMYHNVPYTTRDMHNVKAKQQREGGLDAKSCLRYLRECKKNDPTLYYKEVVDGEDVLQHLFWCDSTSQINYQVFGDVVAFDATYKKNVYLSPLVVFSGVNHYNQTVVFAAALVADEKEETYVWLLQQLKISMKGKAPVSIITNGDREIKSVIEQVFPEAHH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2496 476 Pfam MULE transposase domain 392 476 IPR018289 -
Ahy3g2496 476 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 175 476 IPR031052 GO:0006355
Ahy3g2496 476 Pfam FAR1 DNA-binding domain 187 272 IPR004330 -
Ahy3g2496 476 PANTHER OS02G0262500 PROTEIN 175 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2496 Ahy-Chr3 109312966 109314738 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g2496 FAR1 2.50E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2496 - - ahf:112770447 665.996