Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2467 ATGATCATTCCGGAGAAGAACCGCAAAGAGATCTGCAAATATCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAACCTGGCGAAGCACCCTGAGATTGAGGTGCCAAATCTACAGGTGATTAAGCTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTATTGGTTTCTCACCAATGATGGCATTGAACACCTCAGAACCTACCTCAATCTTCCTTCGGAAATTGTACCTGCCACTCTAAAGAAACAAGCAAAGGCTCCAGGTCGTCCATTTGGTGGTCCACCTGGCGATCGCCCTAGGGGTCCTCCACGCTTTGAAGGAGAGCGTAGGTTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGTCCTGGTGGTGATTTTGGAGGTGATAAGGGAGGGGCACCTGCAGATTACAAGCCTTCTTTTGGGGGTGCTGGTGGAAGACCAGGCTTTGGCCGAGGTTCTGGCAGTTTTGGTGGGGCACCACCATCTAGCTCAAATCTTCCATGA 546 0.5018 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIEVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKAPGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYKPSFGGAGGRPGFGRGSGSFGGAPPSSSNLP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2467 181 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 180 - -
Ahy3g2467 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Ahy3g2467 181 Gene3D - 1 104 IPR036388 -
Ahy3g2467 181 MobiDBLite consensus disorder prediction 112 128 - -
Ahy3g2467 181 MobiDBLite consensus disorder prediction 93 181 - -
Ahy3g2467 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 180 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2467 Ahy-Chr3 107510361 107512648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2467 1 181 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.374 6.99e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2467 K02947 - csin:114270063 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2798 13 109989865 109992109 Ahy3g2467 3 107510361 107512648 hybridization