Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2466 ATGGGTCACCATTCGTGCTGCAACCAACAGAAGGTTAAGAGAGGCCTTTGGTCCCCTGAGGAAGACGAGAAACTCATTCGTTACATTACCACTCATGGCTATGGCTGTTGGAGTGAAGTCCCTGAGAAAGCTGGGCTTCAAAGGTGTGGAAAGAGTTGTAGGCTGAGATGGATTAATTATTTGAGGCCTGATATTAGAAGAGGCAGGTTTACACCAGAGGAGGAGAAGTTAATCATAAGTCTCCATGGTGTCGTAGGCAATAGATGGGCGCACATTGCAAGCCACTTGCCTGGTAGAACTGACAATGAAATAAAGAACTACTGGAATTCGTGGATCAAGAAGAAGATAAGAAAGCCTTCTTCAGCGGCAACAAATAATGCATCTTCACAAACTAGTGTGGATCATTCTTCTCACTTCAGCTATAATAATTATACTAATTCCAATCAACTACTAGATCATCATCAAGATAATCTAACACCAAAGCAACCACTTCATCAAGAATCCTTGTTCTCTTCAACATACCCACTATTTATGTTTGACACTAGTTCACTAGATGGGACCACAACAGACAACAGTTTACGAGTTGATCAAATATTCCAAGATGCTAATGTTGGTTTGAGTTCTGAAACATGGAACTTGAGCCACCACCAGAACCCAGTTCAAGCACTTGCTGCTCCTCCATCAACAACTTTCGCAGTTGCTGTGGGATTGGACACAACCAACTATCTGCCGCCATTGATAGAGAACGTGGAGAGCATGGTACCGGTTGAGGTGCAATCTTGTAGCATGGAGGAGGTAGGAGATGGGGCTCTAGACTGCTTGCAATTGCAGAGGCAACAAGATCAGTTGAATGCATGGGTTGAATCCACACACCAACAATGTCCTAACTTTCTCTTTTGGGACAATGTTGAAGGCCCAATTGGTGGGGAACAAGAACTTGCACCAAATTCTTCATCAAATAAAACTAGTGCTCTTTCTCCTTTTCCTTTGTGA 993 0.432 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPSSAATNNASSQTSVDHSSHFSYNNYTNSNQLLDHHQDNLTPKQPLHQESLFSSTYPLFMFDTSSLDGTTTDNSLRVDQIFQDANVGLSSETWNLSHHQNPVQALAAPPSTTFAVAVGLDTTNYLPPLIENVESMVPVEVQSCSMEEVGDGALDCLQLQRQQDQLNAWVESTHQQCPNFLFWDNVEGPIGGEQELAPNSSSNKTSALSPFPL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2466 330 CDD SANT 69 112 IPR001005 -
Ahy3g2466 330 MobiDBLite consensus disorder prediction 312 330 - -
Ahy3g2466 330 MobiDBLite consensus disorder prediction 308 330 - -
Ahy3g2466 330 CDD SANT 17 61 IPR001005 -
Ahy3g2466 330 Gene3D - 6 66 - -
Ahy3g2466 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy3g2466 330 PANTHER MYB TRANSCRIPTION FACTOR 1 329 - -
Ahy3g2466 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy3g2466 330 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy3g2466 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy3g2466 330 MobiDBLite consensus disorder prediction 119 138 - -
Ahy3g2466 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy3g2466 330 PANTHER MYB DOMAIN PROTEIN 55 1 329 - -
Ahy3g2466 330 Gene3D - 68 139 - -
Ahy3g2466 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy3g2466 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy3g2466 330 SMART sant 66 114 IPR001005 -
Ahy3g2466 330 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2466 Ahy-Chr3 107458423 107460035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2466 1 309 MYB Transcription Factor Family AT1G63910 49.858 5.59e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g2466 Myb_DNA-binding 5.10E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2466 K09422 K02947 gmx:100803556 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2796 13 109208031 109209425 Ahy3g2466 3 107458423 107460035 hybridization