Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2453 ATGGATGAGCTTGCTTGCTTTATGGACTGGGATCTGGAATCCATTGTGAGAGGGTGCCCATCAACTGCCACCACCATCATGGAGCACGATCCAAACCCTAATTTCCTCTTTCATCAACAAGATTATGACCTACTTTTCAGTACTAGTAGTTTTCCTGAATTCTCAGAAACCACAAGGGTCCTTGATGAATTGGACGAGCTTTACAAGCCTTTCTACCCAGTTTTCCACACTCTTTCCCCTCATATTCAAAACAATATTAATGATGATAATAATAATAATAATCATCCCCTACCGTTACCAATAATCCCCAAAGAACCCGAAGATGCCATTAAACAAGACTTGCAGCAAGTTTCCACAGTTTCTAAACCTAAAAAAAGCAAGAAGAGCCTGAACAAGAGGGTGGTGAAGGAGGTTACAGCGGCGGATATTGGAGTTTGCGACGCATGGGCGTGGCGAAAATACGGACAGAAACCTATCAAGGGTTCACCATATCCACGGAGCTATTACAGGTGCAGCAGCTCCAAAGGATGCCTGGCGAGGAAACAAGTTGAAAGGAACCATCTGGATCCAACGATTTTCTTGGTTACATACACCGCTGAACACAACCATCCCTACCCTACTCGCCGCAACTCTCTCGCAGGGATTTCACGCAAGAACAACTCCTTAACAACAACAACAACTACTACTACTACTACAACTTGTTCTTCTTCTTCGAATTCCTCGTCCATGGAAGAACATAAGGGATTCAAGAAGCAGCATGGACTTCTTTGTGAAGCTGCTGAGTTTGGTGATGTTTGGTTTCCAGACACAACAGACATCGATCATGAATTTATGAGGCTTAATAATAAACTAGAACTTCAATTTCATGCTGGTGATTTCATTTCTGGTAATTATTAG 897 0.427 MDELACFMDWDLESIVRGCPSTATTIMEHDPNPNFLFHQQDYDLLFSTSSFPEFSETTRVLDELDELYKPFYPVFHTLSPHIQNNINDDNNNNNHPLPLPIIPKEPEDAIKQDLQQVSTVSKPKKSKKSLNKRVVKEVTAADIGVCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNHLDPTIFLVTYTAEHNHPYPTRRNSLAGISRKNNSLTTTTTTTTTTTCSSSSNSSSMEEHKGFKKQHGLLCEAAEFGDVWFPDTTDIDHEFMRLNNKLELQFHAGDFISGNY* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2453 298 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 246 IPR044810 GO:0003700
Ahy3g2453 298 MobiDBLite consensus disorder prediction 222 241 - -
Ahy3g2453 298 ProSiteProfiles WRKY domain profile. 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g2453 298 SUPERFAMILY WRKY DNA-binding domain 146 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g2453 298 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 246 - -
Ahy3g2453 298 Pfam WRKY DNA -binding domain 147 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g2453 298 Gene3D WRKY domain 129 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g2453 298 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2453 Ahy-Chr3 106177213 106178596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2453 9 297 WRKY Transcription Factor Family AT4G01250 39.604 3.78e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy3g2453 WRKY 4.70E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2453 K13426 - gmx:102663255 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2783 13 107803181 107804587 Ahy3g2453 3 106177213 106178596 hybridization
Ahy15g1058 15 16231385 16232659 Ahy3g2453 3 106177213 106178596 PCT