Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2447 ATGGGAGAGGAAGAGATCATGGATGAATGTGAGTATGAGCATGAGGATAGTATTTTTTACGATGAGAAGTATCCTGATGATGAGTCATACTTAGATGAGTTGCAGCAGGAAGAAGAGTTGGGTGATGAGTTAGACGGTGAGGAGATTTTTGCAGAATTGACAGATTATGATTATAATGATGCATATGGATTGGATTCAATTGAGGATTTATTGAAACTTGACTTTTTAAGCATTGGTGAGGTTGAAGTTGACAAGTTTCACTTTGGAACCCTAGCCATTGCTTTTGAATTTTACAACAGATTTGCAAAGAGCCAAGGTTTCAGTGCAAGAAAAGACAAAAATTGGAAGAACTCAACCGACGAGACCTACATGCAGAGATTTGTATGTTTTCGGCAAGGATATCAATTAGAGAAGTGGTACACTTTGCCAAACAGAAAAAGGGAACCAAAGACCGAGACAAGAACTGGGTACGAAGCTCAATTCCTAGTCAAGTTTGTAGGGGTAACTGGAAGATGGCATGTGACCCGATTTTCAAATCTTCATAATCACGAACTATTGGAAGGCCGGTTGAGCAGGTTATTGCCAGCTCATAGGAGTATGTCCAAAGCCGAAATTGCACTCATGAACAACATGCGCAAGTCGGGGATTAGCACATCCCAGGTTTATGCTTTGCTAGCAAGTCAAAGTGGTGGTTTTGACAAGTTGAACTATGGCCCCAGAGACATGTACAATCAAATAGCTAAGGCGATGCGTGAGATTCCAGAGGACGTGGGTAGAGCATTAAATTATTTGGAGGGGATGGCTGCAAACGATAAATCTTTATACTACAAAGAGTTTCGGGCAACGGTTGGAAGGTTGCTAAATCTCTTTTGGTGTGATGGTTTATATAGAGAGGACTATAAATTGTTTGGAGATGTTGTTGCGTTTGATGCTACGTACAACAAGAATAAATATAGGTGTCCTTTTGTTGTGTTCACAGGTGTCAACCATCACAACCAAACTATTGTCTTTGCTGCATGCATTGTAACAGATGAGACGGATGAGACTTATATATGGGTGTTGCAACAGTTTTTGGAGGCAATGGATGGTAGAGTCCCATCCTCTGTGATAACTGATGGGGCAAGGGCAATGAAGAATGCGATTGAGAAAGTATTCCCTGGTACTCACCACAGATTGTGTGCTTGGCATCTCCTGCGTAATGCAACTACAAATATGTGTAGTCCTCGTTTCACATCTAAGTTTAGGGATTGTATGTTAGGAGATTACGAGATTCCAGTGTTCCGTAACAAGTGGCATATATTGGTAGAGGAATTTGGGGTTGAGGAAAAAGAATGGCTAAATGAAATTTATGAGAAACGTCGATCATGGGCAACATGTTACATCCGAGGGAAGTTCTTTGCTGGATTTAGGACTACATCACGTTGCGAGGGTTTGCATTCATTGATTGGGAAGTACACTAAGCCTCATTATGACTTATCCGAGTTTATTGAGCACTTCCAACGAATGTTGGGCCATATGCGTTTTAGGGAATTTTATGCTGAATATGAATCTGCTCGTGGAGTTCCAGTTATGCAAACTTGTATTGAACCCCTTGAGATGTGTGCTGCTGATACTTACACAAGGGAGGTATTCTTTTTATTCAGGCCTATTCTTGTTCGGTCGGGTGCAATGAGAGTCGTGGATTACCAAACAAGAGACAATAGTATAATTTATTATGTTTGTAGGTATGCCAAACCAACAAAGGTGTGGGAGGTTGAGTGGGTGGATAATGGTAACGCAATCACTTGTTCATGCATGCGTATGGAATCATTCGGTATTCCCTGTGAACACATTATCTCTGTATTGGTCCGTAGGGATGTGCGCGAAATTCCTAAATGTCTAGTGTTGCATAGATGGACTAAGAAAGCAAAAGAATCTATGTCTGAGTCAAGTAGTTTTACAAGCGAATTACAAGTTAGCAATCGACTTTGTATCCTCAATGAGTGTGCTAGGATGATGTCAGAGGTTGCATGTGCTACTACAGAGAGGTTCCATGAAGCAAGGGATCTTATGCTTGATCTTTATAGCTCATACAAAGCACTAGATGAAGGGAACACGCCTTCGAAACCTAGATTGGGAGGTGGTACCAATCCTAAAGGGCATAGTGGTCGGAAAAAGCCCCAACGTTGCAGTAATTGCAAGAAACCTGGTCATAATAAAACTTCTTGTTCAAAGCGCAATGAAAATGCTTTCAGTACACAAGGTAGCTCTACCCGTCAAACTGATGCAATTTATGATGGTGAATGCATGGATGATGTGGAATACGAAACTCAAGAATGGTGGTGA 2325 0.4125 MGEEEIMDECEYEHEDSIFYDEKYPDDESYLDELQQEEELGDELDGEEIFAELTDYDYNDAYGLDSIEDLLKLDFLSIGEVEVDKFHFGTLAIAFEFYNRFAKSQGFSARKDKNWKNSTDETYMQRFVCFRQGYQLEKWYTLPNRKREPKTETRTGYEAQFLVKFVGVTGRWHVTRFSNLHNHELLEGRLSRLLPAHRSMSKAEIALMNNMRKSGISTSQVYALLASQSGGFDKLNYGPRDMYNQIAKAMREIPEDVGRALNYLEGMAANDKSLYYKEFRATVGRLLNLFWCDGLYREDYKLFGDVVAFDATYNKNKYRCPFVVFTGVNHHNQTIVFAACIVTDETDETYIWVLQQFLEAMDGRVPSSVITDGARAMKNAIEKVFPGTHHRLCAWHLLRNATTNMCSPRFTSKFRDCMLGDYEIPVFRNKWHILVEEFGVEEKEWLNEIYEKRRSWATCYIRGKFFAGFRTTSRCEGLHSLIGKYTKPHYDLSEFIEHFQRMLGHMRFREFYAEYESARGVPVMQTCIEPLEMCAADTYTREVFFLFRPILVRSGAMRVVDYQTRDNSIIYYVCRYAKPTKVWEVEWVDNGNAITCSCMRMESFGIPCEHIISVLVRRDVREIPKCLVLHRWTKKAKESMSESSSFTSELQVSNRLCILNECARMMSEVACATTERFHEARDLMLDLYSSYKALDEGNTPSKPRLGGGTNPKGHSGRKKPQRCSNCKKPGHNKTSCSKRNENAFSTQGSSTRQTDAIYDGECMDDVEYETQEWW* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2447 774 Pfam MULE transposase domain 306 400 IPR018289 -
Ahy3g2447 774 SMART 26again6 594 621 IPR006564 GO:0008270
Ahy3g2447 774 Pfam FAR1 DNA-binding domain 96 186 IPR004330 -
Ahy3g2447 774 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 687 IPR031052 GO:0006355
Ahy3g2447 774 Pfam SWIM zinc finger 591 615 IPR007527 GO:0008270
Ahy3g2447 774 ProSiteProfiles Zinc finger SWIM-type profile. 583 619 IPR007527 GO:0008270
Ahy3g2447 774 PANTHER OS02G0262500 PROTEIN 87 687 - -
Ahy3g2447 774 MobiDBLite consensus disorder prediction 695 756 - -
Ahy3g2447 774 MobiDBLite consensus disorder prediction 727 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2447 Ahy-Chr3 105534547 105536986 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g2447 MULE 9.40E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2447 - - ahf:112720852 793.497