Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2437 ATGGCTTCAATTGGGGTGTCAGAGATGCTTGGAAACCCCATCAAGTTGAGTGGTGCAACAAGGTCAGCACCATCAACTTCTAGCCCTGCCACCTTCGAGACTGTGGCTCTCTTTGGTAAGAAGAAGGCAGTACCACCTCCTCCTTCAAAGAAAGCTGCTACTGCTGTCACTCCTACCAATGATGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCAATCCAAGATCCCACCATACTTGACTGGAGAAGTGCCCAGAGACTATGGTTATGATCCTTTTGTTCTCAGCAAGAAGCCGGAGGACTTTGCCAAGATTCTGGCTGAAGTTGAAAACCTTGCTACTAATTGTAATGAGACTGAGCTTAAGTTGTATTGTTTCTGTATTTTTTTTCAATTTTTAGTTTTGGAATTCGAACTCAAGATTTATTTTGTATTTGAGTATTAG 471 0.4374 MASIGVSEMLGNPIKLSGATRSAPSTSSPATFETVALFGKKKAVPPPPSKKAATAVTPTNDELAKWYGPDRRIFLPEGLLDQSKIPPYLTGEVPRDYGYDPFVLSKKPEDFAKILAEVENLATNCNETELKLYCFCIFFQFLVLEFELKIYFVFEY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2437 156 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 116 - -
Ahy3g2437 156 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 116 IPR001344 GO:0009765|GO:0016020
Ahy3g2437 156 Gene3D Chlorophyll a/b binding protein domain 73 122 - -
Ahy3g2437 156 SUPERFAMILY Chlorophyll a-b binding protein 65 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2437 Ahy-Chr3 104177940 104180690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2437 1 116 Chloroplast and Mitochondria Gene Families AT4G10340 60.684 2.89e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2437 K08916 - ahf:112717527 166.777