Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2397 ATGGAAATAACGGATGAAAGAAACACATTTGATGACATTGGGTGGTGTTTATCAGATCTGATATTATCATCATCGGGTTCAAACACGTTGGACTCAATCTTCTCTCACTGCCCTCCCACTAATCCCACAGTGGCCTTCCAGCAACCGTTCGGGTGCTCCTCCGTCTACACCCGCCAAAGAAACATCCTGCAGAAGTTGTACGAGCAAAGCCGAGTGACCACGAAGCGTTCTTGTTTTGTTGTTCCCCCTCCCTCGCCATGGAAGAAGAAGCTGTACAGAGGAGTGAGGCAGAGGAGCTGGGGAAAATGGGTGGCTGAGATTCGACTCCCTCAGAACAGAATGAGGGTCTGGCTTGGCACTTACGATACTCCAGAAGCCGCTGCTTATGCTTATGACCGCGCTGCTTATAAGCTTCGTGGCGAGTATGCGCGCTTGAATTTCCCTGCTTTGAAGGAACCCTCCAGTGATGTCCTCTTGTCTTCCCAAGATTCCATCAAGTTTAACTCTCTCAACTGCTACGTGGATGCTAAGATTCGTGCCATATGCCAAAGGCTCAAGCGAGAGAGGAGCATGCGCAAGAATAATAACAACAATACCACTAGTCCTCTCGAGAATCCACGGATGTTCTTGTCTAGTTCAAGCGCCGAGTTTGTTGAAGCAGCTGCTGGCGGTTTCCTTTCAGTAGAGGACAGTATCGTTTTAGCAGAGTGTCCCCCAACAATGACAACAGCAGATTCTGAATCATCCGATGATTTCCAAAACTGTTCCTTAGCAAGACTGCCTTCCTTCGATCCTGACTTGATTTGGGAAGTTCTGCCTAACTAA 825 0.4836 MEITDERNTFDDIGWCLSDLILSSSGSNTLDSIFSHCPPTNPTVAFQQPFGCSSVYTRQRNILQKLYEQSRVTTKRSCFVVPPPSPWKKKLYRGVRQRSWGKWVAEIRLPQNRMRVWLGTYDTPEAAAYAYDRAAYKLRGEYARLNFPALKEPSSDVLLSSQDSIKFNSLNCYVDAKIRAICQRLKRERSMRKNNNNNTTSPLENPRMFLSSSSAEFVEAAAGGFLSVEDSIVLAECPPTMTTADSESSDDFQNCSLARLPSFDPDLIWEVLPN* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2397 274 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 12 273 - -
Ahy3g2397 274 SUPERFAMILY DNA-binding domain 91 149 IPR016177 GO:0003677
Ahy3g2397 274 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 12 273 - -
Ahy3g2397 274 SMART rav1_2 91 154 IPR001471 GO:0003700|GO:0006355
Ahy3g2397 274 ProSiteProfiles AP2/ERF domain profile. 91 148 IPR001471 GO:0003700|GO:0006355
Ahy3g2397 274 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Ahy3g2397 274 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Ahy3g2397 274 CDD AP2 90 150 IPR001471 GO:0003700|GO:0006355
Ahy3g2397 274 Gene3D AP2/ERF domain 91 149 IPR036955 GO:0003700|GO:0006355
Ahy3g2397 274 Pfam AP2 domain 92 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2397 Ahy-Chr3 100369760 100370993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2397 10 274 AP2-EREBP Transcription Factor Family AT1G64380 42.216 5.02e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy3g2397 AP2 8.80E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2397 - - aip:107634547 496.893