Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2386 ATGACATACATGGAAACTCCATTAGAATCAAGTGCAGACAATCATCTTAAACCCAAAGAAGAAGAGAAGAAAGAAGAAGACAGCTTGAGTCTTGCCATGGAAATGCTGGGTTTGAATGTGGCTCCACTGGCGGTAAATTCAGCTGTTGAGCTTGGTGTGTTTGACACCATAGCCAAAGCTGGTGAAGGTGCCATGCTCTCTGCAAAGGAAATTGCGTCTCAGATTGGGAGCAACAACTCAAAAGCACCTCACATGCTGGATCACTTTCTTAAGTTGTTGGCAAGTCACTCTCTCCTTTGTTGCTCTGTTTTCCAACAAGATCATAGTCACAGACTCTACAGCCTCTCCCCTAGCTCCAAGTATTTTGTCACCGATGCTGATGACGGCAGCTCGTTGGGACCAACCTTTGCTTTGCTTCTCGACAATGTCTTCTACCAAAGCTGGACGGAAGTGAAAAGAGCAATTATGAAAGGTGGAATTCCATTCAACAGGGTTTATGGCATGCATGCCTTTGAGTATCCAGGCGTAGATCAAAGGTTCAATTAGGTGTTCAATAAAGCTATGATTGAAGACGAACGACTAAATGACATTGCTGGGAGTGCATATTATGTTGCACCAGAGGTACTTCACAGGTCCTATAGTGTGGAAGCAGAAATATGGAACCAGAGATGGAATTCCACCTATCTAATGTTGGAACATGCTGAAAAATTTGAAAAAGCTTTTGATAGACTTTATAATCAAGAAACTGATTTCTTTAGATGGTTTGGAGAGAATAGTAGGGGTAAAAAGAAAGTTGGTCCACCCACGGCTAAATACGATAAATATTGGGGACCAATTGACAAGTTTATTCCTTTGATACGTGTTGCCTTTGTTTTAGATTCTCGATATAAACTTGATTATCTTTCTTGGTGTTTGGAGGATGTATATGATAGGAAAGTGGCTACTAGTATGACTAGTTTTGTGAAATTTACATCGGAGACATTGTACAAATTTTATTCAAAAGAAATTGTAGCTGATAAAGTTCTTGATGATGGTGGCGGTTCCTCTAGAGTTGTTTTGGATGATAAAGATAGTGATCAGTTTAGTGTTAAGGGTGTTGCTACAAATAGAGTGAATTTATGA 1122 0.4002 MTYMETPLESSADNHLKPKEEEKKEEDSLSLAMEMLGLNVAPLAVNSAVELGVFDTIAKAGEGAMLSAKEIASQIGSNNSKAPHMLDHFLKLLASHSLLCCSVFQQDHSHRLYSLSPSSKYFVTDADDGSSLGPTFALLLDNVFYQSWTEVKRAIMKGGIPFNRVYGMHAFEYPGVDQRFN*VFNKAMIEDERLNDIAGSAYYVAPEVLHRSYSVEAEIWNQRWNSTYLMLEHAEKFEKAFDRLYNQETDFFRWFGENSRGKKKVGPPTAKYDKYWGPIDKFIPLIRVAFVLDSRYKLDYLSWCLEDVYDRKVATSMTSFVKFTSETLYKFYSKEIVADKVLDDGGGSSRVVLDDKDSDQFSVKGVATNRVNL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2386 372 MobiDBLite consensus disorder prediction 12 27 - -
Ahy3g2386 372 Gene3D - 9 122 IPR036388 -
Ahy3g2386 372 Pfam Dimerisation domain 45 94 IPR012967 GO:0046983
Ahy3g2386 372 SUPERFAMILY "Winged helix" DNA-binding domain 24 125 IPR036390 -
Ahy3g2386 372 Gene3D Vaccinia Virus protein VP39 124 222 IPR029063 -
Ahy3g2386 372 MobiDBLite consensus disorder prediction 1 27 - -
Ahy3g2386 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 5 189 - -
Ahy3g2386 372 PANTHER O-METHYLTRANSFERASE 5 189 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2386 Ahy-Chr3 99489832 99495796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2386 8 187 Monolignol Biosynthesis Gene Families AT5G54160 40.984 1.45e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2386 K13066 - ahf:112790788 736.102