Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2353 ATGGAGGACGCGGAATCGAAAGAGAGGATTGAGGAAACGGTGCGGACGATTCTAGAAGGATCCAACATGGATGAGATGACAGAGTCGAAGATTCGGAAGCAGGCTTCCACCCATCTCGGCCTCGACCTCTCCCAGCCGCCCCTCAAAGCCTTCGTCAAGCAGGTCGTTCAAGCATTCCTCGACGAGAAGCAGCGCCAACCTGAACCTGAAGCAGATCACAACAAGCCGGAGTACGATGACGACGGCGATCTCATCATCTGCAAGCTCTCTGAGAGGAGAAGGGTCACCGTTCAGGACTTCCGAGGCAAAACTTTGGTCTCCATTCGCGAGTATTATCGAAAGGACGGCAAGGAACTCCCTACCTCTAAAGGAATAAGTTTGACAGAGGAGCAATGGTCAGCCTTCAAGAAAAATGTGCCTGCTATAGAAAAGGCCATTAAGAAAATGCAGTCCGGCAACATATAA 465 0.5097 MEDAESKERIEETVRTILEGSNMDEMTESKIRKQASTHLGLDLSQPPLKAFVKQVVQAFLDEKQRQPEPEADHNKPEYDDDGDLIICKLSERRRVTVQDFRGKTLVSIREYYRKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMQSGNI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2353 154 Gene3D - 1 62 - -
Ahy3g2353 154 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 151 - -
Ahy3g2353 154 MobiDBLite consensus disorder prediction 63 81 - -
Ahy3g2353 154 Pfam Transcriptional Coactivator p15 (PC4) 87 138 IPR003173 GO:0003677|GO:0006355
Ahy3g2353 154 MobiDBLite consensus disorder prediction 61 81 - -
Ahy3g2353 154 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 151 IPR045125 GO:0003713|GO:0060261
Ahy3g2353 154 Pfam DEK C terminal domain 5 60 IPR014876 -
Ahy3g2353 154 PIRSF RNA_polymII_KELP 1 153 IPR017415 -
Ahy3g2353 154 Gene3D Transcriptional Coactivator Pc4; Chain A 76 152 IPR009044 GO:0003677|GO:0006355
Ahy3g2353 154 SUPERFAMILY DEK C-terminal domain 4 61 - -
Ahy3g2353 154 SUPERFAMILY ssDNA-binding transcriptional regulator domain 86 149 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2353 Ahy-Chr3 94061986 94063833 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Ahy3g2353 DEK_C 9.00E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2353 K25815 - gmx:100499671 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2674 13 97737455 97738866 Ahy3g2353 3 94061986 94063833 hybridization