Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2339 ATGTTTTACATCTTGATTATTGGTCAAAGTGCCTTTTCAGTTTATCAGCAGCATTTGGCTAACCGACCTGTGAATGTTTTTCGTGATCTTCTTGAGTTCAAAAGTGATCGTGCTCCAATACCTGTAGGGAAGGTTGAACATGCTTCAGCTATTGTGCATCGGTTCTGCACTGGTGGGATATCTTTTGGAGCTATTTCAAGAGAAACTCATGAAGCAATTACAATCGCAATGAACAGATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGTTAATATTATCAAAGCCTCGAATTTTCTGTCTTTCGCAATATGGAACTTTTGTATGGTGCTCTCAAAAATTCACTTCTTTCTTACACACTCGCTCCCTCACTGACACGACTTCATCAATGTCATTCAAGAAACATTACGGAGGGTCAAATAATAATGCTTTTCAGATGCAAGCAGAGATTCAATTGCTTTCGCCACTCCTTCCTGTTCGTCAATTGAGCTTCCTCAGGTTGCTGGTCCATCATGGGCACCCTTTGCTTCTTGGATCACTGGTTGAAAGGAAATTTCGTGATGTTGAAGCACAGGAAGATAACCTAAGGCGGCAAATCATTACTTTCAAGTCAGATTGTGATGAAAAGGACAAGGAGATCATACTTGAGAGGCAATCCCTTTCTGAAAGGCAGAAGATTTTACAGCAAGAACATGAAAGGCTACTTCAATCACAAACGTTGCTTAATGAGAGAGAGGATCACCTTTTTAGTATATCTTAG 762 0.4029 MFYILIIGQSAFSVYQQHLANRPVNVFRDLLEFKSDRAPIPVGKVEHASAIVHRFCTGGISFGAISRETHEAITIAMNRLGGKSNSGEGGELILSKPRIFCLSQYGTFVWCSQKFTSFLHTRSLTDTTSSMSFKKHYGGSNNNAFQMQAEIQLLSPLLPVRQLSFLRLLVHHGHPLLLGSLVERKFRDVEAQEDNLRRQIITFKSDCDEKDKEIILERQSLSERQKILQQEHERLLQSQTLLNEREDHLFSIS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2339 253 Pfam Conserved region in glutamate synthase 11 92 IPR002932 GO:0006537|GO:0015930|GO:0016638
Ahy3g2339 253 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 9 95 - -
Ahy3g2339 253 SUPERFAMILY FMN-linked oxidoreductases 16 96 - -
Ahy3g2339 253 Coils Coil 218 238 - -
Ahy3g2339 253 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 9 95 - -
Ahy3g2339 253 Gene3D Aldolase class I 7 245 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2339 Ahy-Chr3 92034973 92041421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2339 56 173 Homeobox Transcription Factor Family AT3G61150 33.051 3.65e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2339 K00284 - ahf:112790748 494.967