Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2307 ATGGGGATTTGTTTCAGCATTGAAGATCAAAAGCATCACTCCATCTCCGATTCGAGTTCTAAGCCTCGGCCTCAAGGATATGAATCTGCATCGTCGACGACTCCGCTGAGTTCGATGAATATCAAAGATCTGCGGCAGAGTGCTGGATACTGCAATGTTGATATATTCACGTACGAGGAGCTGAGGCTAGCGACAAAGTACTTCCGCCCTGACTTGATTCTTGGAGAAGGTGGCTTCGGAGTGGTGTATAAAGGTGTCATTGATGATAGTGTGAGGCCAGGCTTCAAGCCCACTCAAGTCGCCATCAAGGAGCTTAATCGTGAAGGATTTCAAGGCGATAGGGAATGGCTCGCTGAAGTTAACTACTTAGGTCAATTCAGTCACCCAAATCTTGTAAAGCTCATTGGATACTGCTGTGAGGATGAACACCGGTTATTAGTCTATGAGTACATGGCAAGTGGCAGCTTGGAGAAACATCTTTTTCGCAGAGTGGGCTCAACACTAACTTGGTCAAAAAGAATGAAGATTGCTTTACACGCTGCAAGAGGGCTTGCTTTTCTTCACGGTGCAGAGAGGCCCATCATATATCGTGATTTTAAGACATCAAATATCCTGCTAGATGCGGATTTCAACGCAAAGCTTTCAGACTTTGGTCTTGCTAAGGATGGGCCAATGGGGGACCAAACCCATGTTTCAACACGAGTGATGGGCACATACGGATATGCTGCTCCTGAGTATGTCATGACTGGGCATTTGACAGCTCGAAGTGATGTGTATGGCTTTGGGGTGGTGCTACTTGAATTGCTTATTGGTAGGAGAGCGTTAGACAAGAGTAGGCCCAGCCGAGAGCATAACTTGGTTGAGTGGGCACGGCCACTGTTGAATCATAACAAGAAACTTCTAAAAATTTTAGACCCTAAAATCGAAGGGCAATATTCAAGTAAAACCGCAATAAAGGTAGCTAATTTGGCATACCAGTGTCTTAGCCAAAACCCGAAAGGCAGACCCCTGATGAGCCAGGTAGTTGAAATTCTTGAAAATTTTCAGTCAAGTGGGGAAAATGAGGAAGAACAAATGATTCAAAATGGCAGCAGCAGCCTAACCATTTATGAGGTTCCGAAGGGCGGCAATGGCAATTCACTTGAAGGCAGGAACCAAAGTCGAAATGAGCTTCATAGGAACGAACGAAGAATAGAAAAAAGCAAGAGTCAGCCTTCAAATCGTAATTTATCCGGTTCTTCAGATGTAATGCTCGTTGATAAAGTCAGCTCGTAA 1275 0.4486 MGICFSIEDQKHHSISDSSSKPRPQGYESASSTTPLSSMNIKDLRQSAGYCNVDIFTYEELRLATKYFRPDLILGEGGFGVVYKGVIDDSVRPGFKPTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKIEGQYSSKTAIKVANLAYQCLSQNPKGRPLMSQVVEILENFQSSGENEEEQMIQNGSSSLTIYEVPKGGNGNSLEGRNQSRNELHRNERRIEKSKSQPSNRNLSGSSDVMLVDKVSS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2307 424 MobiDBLite consensus disorder prediction 368 385 - -
Ahy3g2307 424 SUPERFAMILY Protein kinase-like (PK-like) 49 346 IPR011009 -
Ahy3g2307 424 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Ahy3g2307 424 Gene3D Phosphorylase Kinase; domain 1 42 150 - -
Ahy3g2307 424 ProSitePatterns Protein kinases ATP-binding region signature. 74 103 IPR017441 GO:0005524
Ahy3g2307 424 MobiDBLite consensus disorder prediction 1 35 - -
Ahy3g2307 424 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 26 395 - -
Ahy3g2307 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Ahy3g2307 424 CDD STKc_IRAK 74 348 - -
Ahy3g2307 424 Coils Coil 384 404 - -
Ahy3g2307 424 MobiDBLite consensus disorder prediction 404 424 - -
Ahy3g2307 424 Gene3D Transferase(Phosphotransferase) domain 1 151 371 - -
Ahy3g2307 424 PANTHER OS01G0588500 PROTEIN-RELATED 26 395 - -
Ahy3g2307 424 MobiDBLite consensus disorder prediction 19 35 - -
Ahy3g2307 424 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2307 424 MobiDBLite consensus disorder prediction 386 403 - -
Ahy3g2307 424 MobiDBLite consensus disorder prediction 368 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2307 Ahy-Chr3 87375299 87379254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2307 56 345 Glycoside Hydrolase AT3G07070 51.877 9.07e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy3g2307 PK_Tyr_Ser-Thr 1.40E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2307 - - gmx:100800465 688.337