Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2306 ATGGAGACGGAGGAGGGAGAAAATGGAGTGATCGTGCCCCCTCGTTCCGGTGCTGGTAAAAGCCTGTTCGGAATCGCCGCCGCAGCTTCTAGAAGGATGCAACAACAGCAACGGCATAGAGAGAAGGAGAACTCTAACGCTCCTTCGCCTTCAACTTACGATATGGCTGTAACAGGGAGAGTTAGTAGAAAGAAGAAGCATAAGCGTCTTCAGGAATTTTTTACAACGGACTATGATAATTTGAGGAGCGATGGTCCTCCTATTGGTCTCGAATTTGATTCTCTTCCTTCTCGGTCAGAGAGTTACACTCCTTCATATGTAGAGGACTACGGGCCCGCCAAAATGAGAAAGGTTTCCAAGAGTGCATGTGGAAGTCACCCAAGCTTTAATAAGAAAACATCAGTGAAGAAACATGGTATGGGCAAAGGTTTGATGACAGTCTGGAGGGCAACCAATCCTTATGCTGAAGACCTTCCAAATGACTTTGATTTTGATAGCCGAGAGCAAGGCACTCATCTAGTCTCAAAGTCTATGGTACAGAAACCAGTTCGTGAGAACAGAAGAAATAAAACACAGCACACGATAAATAAGTCTCAGGACAAGAGGAAACTTTCCATACAAAGAGAAATGGGGAAATCTAATCTATATGTAACTCAGAACCAGTCATCGGAGGAAAAATGTGAACTTGCAGTGGATAGCGCAATATTTGAGGAGGGATTTGATCAAATTTCAATGTTAGTCGATGATGAGGAGCTTGAGATGAGAGAGTTCCGAGCAGGAATCAATATGCTGTTGTGTTCTGATCATCTTGCTGCAAGTGGAATGTTTGGTTGTGCACTCTGCAAAGATGTGCTAGTTAAGTTCCCCCCAGATACTGTCAAAATGAAGAAACCTATCTGTTTGCAACCTTGGGATTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCCTTTATACATATGCTACAGTAGTCAATATATGCCCATTCACTCTGGATGAGTTTGTTCAAGCATTTCATGATAAGGACTCGGTTTTAATTGGAAAGACTCACATAGCCCTTCTCTCACTTCTTCTATCTGACATTGAAGTGGAGCTTACCAATGGTTTTTCACCTCATTTAAATAAGTCCTGCAATTTTCTTGCATTGCTTCATTCAGTCGAAAGTCAAGAATATTCTGTAGACTGCTGGAGAAGTTCTTTGAATGCTCTTACTTGGGTTGAAATACTTCGTCAAGTGCTTGTTGCTTCTGGATTTGGTTCAAAGCAAGGGGCCTTACGAAGAGAGGCACTTAGCAAGGAGTTGAATCTTTTTGTAAACTATGGCCTACACCCTGGCACCTTCAAGGGAGAGTTGTTTAAAATCTTGTCAGAGCGAGGAAACAATGGATGCAAGGTATCTGAGCTAGCAAACTTAAAACAGATTGTAGAATTAAACCTTGATGGCACAACTGGGGACCTGGAATCTTTAATATGTTCCACACTTTCAAGTGATATTACTTTATTTGAAAAGATTTCACCATCTGCATATCGTGTGCGTATGAGCACTGTTACGAAGGACATAGATGATTCTAAATCAGATATGGAGGATGCTGGGAGTGTTGATGATGAAATCAATTACAATGATACGTTTAGCAGTGATGATGATTTTGAAAATGATTCAAGAGGCGCCAACATGAGAAAACTGAAGTGTGTTAACGGTCATAAAACCAAGAATAATATGCTCAAAGTATATACTGAAATTGATGAGAGCCATCCAGGAGAAATATGGTTGTTAGGACTGATGGAGAGTGAATATTCAGATTTGAAAATTGAAGAAAAATTGAATGCTTTGGCTGCTCTAACTGATCTTCTTTCCTCTGGTTCCAGCATCAGGATGAAGGACCCAACAAAAATCACAGTTGACTGCCATTCGAGCATCCAACATGGTTCTGGAGCGAAAATAAAAAGAGCATCGTCAATAAAGAAGCCGGGACCATTTTGGTACCAGATTGGACAAATGCAACATGCAAAAGAATTGAACTCATCTTTTCTACCATGTCCAGTAGATTCCACATCCTTAATCTCAAATTCCAGTAACCAGGGAGAGAAGGAAAAAGGGTCAATTGATTCACATCCCATTCAATCAGTATTTTTGGGATCTGATCGTCGCTACAATAGATACTGGCTTTTCCTCGGCCCTTGTAATGCTGATGATCCTGGCCACAGGAGGGTTTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATTGATACTGAAGAGGCCTTATGTGCCTTGCTATCAGTGTTAGATGATAGAGGGAAACGGGAGGCTCATCTCATTGAATCTCTGGAGAAGCGGCAAGCATCTCTATGCAGATTTATGTCTAGTATTAAGGTTAACAGTACTGGAATGGGTTCTATGTTGCATTCTGATCAATCTGAGCTGGATATGGTTTCAGAAGACAGTTATTCCCCGGTATCTGATGTAGACAATCTGAATCTGATTGAGACTGCAAAAGACACAATACCTTCAGCAGGGGCTGTGATTATTGAAGCTGGAAAGAAGGGTGAGGAACAAGTGCAAAAGTGGCTCCGTGCTCAAGGATATGATTCTTGGATTTGGGGATCCTTTTATTTAGATCTTAACGTTGTAAAATATGGTAGAAGGTCTTATCTTGATTCTCTAGCGAAATGTCTGACTTGTCATGATCTTTATTGGAGAGACGAGAGACACTGCAGGATTTGCCATACCACATTTGAGCTTGATTTTGATCTAGAAGAGAGATACGCCATTCACAGAGCTACATGCTGTCAGAAAGAGGATGTTAATACATTTCCAAATCATAAAGTTCTATCATCACAGATTCAATCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGAAGATGCCTTAGTAGGTGCTTGGAGGAAATCTGCTCATAAGCTATGGGTTAAACGACTCAGGCGCACTTCATCTTTAGTTGAGCTTTTGCAGGTTCTCTCTGATTTCGTTGGTGCAATAAACAAGCACTGGCTGTTTGAGTGCAACTTACCAGATAAAGTTGTTCAAGAAATCATTGCATATTTTGCATTAATGCCCCATACATCATCAGCCCTTGCTCTTTGGTTGGTGAAGTTAGATGCCATAATTGCTCCCTACCTTGACAGAGGTCGTCCTCAGAAGAAGCAGGGAATCGGCAATCATGGTCATTGCTGA 3219 0.4116 METEEGENGVIVPPRSGAGKSLFGIAAAASRRMQQQQRHREKENSNAPSPSTYDMAVTGRVSRKKKHKRLQEFFTTDYDNLRSDGPPIGLEFDSLPSRSESYTPSYVEDYGPAKMRKVSKSACGSHPSFNKKTSVKKHGMGKGLMTVWRATNPYAEDLPNDFDFDSREQGTHLVSKSMVQKPVRENRRNKTQHTINKSQDKRKLSIQREMGKSNLYVTQNQSSEEKCELAVDSAIFEEGFDQISMLVDDEELEMREFRAGINMLLCSDHLAASGMFGCALCKDVLVKFPPDTVKMKKPICLQPWDSSPEIVKKLFKVFHFLYTYATVVNICPFTLDEFVQAFHDKDSVLIGKTHIALLSLLLSDIEVELTNGFSPHLNKSCNFLALLHSVESQEYSVDCWRSSLNALTWVEILRQVLVASGFGSKQGALRREALSKELNLFVNYGLHPGTFKGELFKILSERGNNGCKVSELANLKQIVELNLDGTTGDLESLICSTLSSDITLFEKISPSAYRVRMSTVTKDIDDSKSDMEDAGSVDDEINYNDTFSSDDDFENDSRGANMRKLKCVNGHKTKNNMLKVYTEIDESHPGEIWLLGLMESEYSDLKIEEKLNALAALTDLLSSGSSIRMKDPTKITVDCHSSIQHGSGAKIKRASSIKKPGPFWYQIGQMQHAKELNSSFLPCPVDSTSLISNSSNQGEKEKGSIDSHPIQSVFLGSDRRYNRYWLFLGPCNADDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREAHLIESLEKRQASLCRFMSSIKVNSTGMGSMLHSDQSELDMVSEDSYSPVSDVDNLNLIETAKDTIPSAGAVIIEAGKKGEEQVQKWLRAQGYDSWIWGSFYLDLNVVKYGRRSYLDSLAKCLTCHDLYWRDERHCRICHTTFELDFDLEERYAIHRATCCQKEDVNTFPNHKVLSSQIQSLKAAIYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSSLVELLQVLSDFVGAINKHWLFECNLPDKVVQEIIAYFALMPHTSSALALWLVKLDAIIAPYLDRGRPQKKQGIGNHGHC* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2306 1072 MobiDBLite consensus disorder prediction 181 202 - -
Ahy3g2306 1072 MobiDBLite consensus disorder prediction 1 64 - -
Ahy3g2306 1072 PANTHER OS07G0619600 PROTEIN 38 1063 - -
Ahy3g2306 1072 Coils Coil 26 46 - -
Ahy3g2306 1072 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 590 628 IPR028942 -
Ahy3g2306 1072 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 38 1063 IPR044977 GO:0006357
Ahy3g2306 1072 MobiDBLite consensus disorder prediction 175 202 - -
Ahy3g2306 1072 ProSiteProfiles DDT domain profile. 308 367 IPR018501 -
Ahy3g2306 1072 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 711 784 IPR028941 -
Ahy3g2306 1072 SMART testlast3 308 367 IPR018501 -
Ahy3g2306 1072 Pfam DDT domain 311 364 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2306 Ahy-Chr3 86547574 86554701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2306 228 712 Homeobox Transcription Factor Family AT5G44180 28.403 1.95e-46 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Ahy3g2306 WSD 2.80E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2306 - - aprc:113853612 1535.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2629 13 91954297 91961597 Ahy3g2306 3 86547574 86554701 hybridization