Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2296 ATGGCAGGTGCAGGTGCCATGAAGAAGGTCGACAGGATTCGCCAAATCGTTCGCCTCAAGCAGCTCATGATGCGGTGGAGGGTCATCAGCCACCGCCGCCACCACCACCACTACGACTCCTCCTCCCTCGATTCAAAACCCTGCACATCGTCGCCACGACGCGCTCCCTCGGGGTTCGTGTTCGTGTACGTGGGTCAAGAACGCAAACGTTTCGTGATTCCCGCAAGATTCCTCAACCTGCCGGTGTTCGCTGATCTCCTCGAAGAAACCGAAGAGGTTTTCGGTCTTCGATGTAGCGGCGGTTTACTCCTCCCTTGCGAAGTTGCGTTCTTCAGTAACATCGTGAAGCACCTCGAGAAAGACGAACACAAGTACGGGAAGCTTTCTTTGGAGGATTTCGTGAACATGGTTTCTGACTTGGCTTCTGATTCTTCCTGCAAAGAAGGCATTGTTGCCTTCACTCCTCTCTTGCAGAAAGCAAGGGTTTAG 489 0.5337 MAGAGAMKKVDRIRQIVRLKQLMMRWRVISHRRHHHHYDSSSLDSKPCTSSPRRAPSGFVFVYVGQERKRFVIPARFLNLPVFADLLEETEEVFGLRCSGGLLLPCEVAFFSNIVKHLEKDEHKYGKLSLEDFVNMVSDLASDSSCKEGIVAFTPLLQKARV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2296 162 Pfam Auxin responsive protein 18 117 IPR003676 GO:0009733
Ahy3g2296 162 PANTHER - 10 152 - -
Ahy3g2296 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 152 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2296 Ahy-Chr3 85179343 85179831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2296 9 134 Calmodulin-binding Proteins AT3G43120 34.437 1.63e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2296 K14488 - gmx:100793118 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2621 13 91303233 91304283 Ahy3g2296 3 85179343 85179831 hybridization