Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2276 ATGGTGGAAAAGACCAAGGGTAGGAAGGAAGAGGTTGTTACTCGAGAGTACACCGTCAACCTCCACAAACGCTTACATGGCTGCACCTTCAAGAAGAAGGCTCCTAAAGCAATAAAGGAGATAAGGAAGTTTGCTCAGAAGGCCATGGGGACTAATGATGTGAGAGTGGATGTGAAGCTGAACAAGTTTGTGTGGAGCCAGGGGATCCGGAGTGTGCCGAGAAGGATCCGGGTGCGCATTTCCCGCAAGAGGAACGACGATGAGGATGCAAAGGAAGAGCTTTACTCCCTTATTACAGTTGTTGAAATCCCTAAGGAAGAGCTTAGAGGTTTGGGCACCAAGGTCATTGAAGATGAGGATTGA 363 0.4848 MVEKTKGRKEEVVTREYTVNLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKFVWSQGIRSVPRRIRVRISRKRNDDEDAKEELYSLITVVEIPKEELRGLGTKVIEDED* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2276 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Ahy3g2276 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Ahy3g2276 120 PANTHER 60S RIBOSOMAL PROTEIN L31 1 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
Ahy3g2276 120 Gene3D - 9 120 IPR023621 -
Ahy3g2276 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Ahy3g2276 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Ahy3g2276 120 PANTHER 60S RIBOSOMAL PROTEIN L31-2-RELATED 1 120 - -
Ahy3g2276 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2276 Ahy-Chr3 81542284 81543527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2276 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 79.832 4.42e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2276 K02910 - gmx:100305583 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2595 13 88449739 88450980 Ahy3g2276 3 81542284 81543527 hybridization