Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2246 ATGGCATTTGATCAAACCTCTGTTCCCTGCGATCTAAGATCACTAAATGTTACTCGAGCTGTCGCCGAAGAGCCACTCGTTCCTCCTGCTAGTAAACCGCTTCAAACTGCAGAATATTTCCCTCCAAATTCGGTTTGGGACCATGTTAGCTCTGGTGCGGTGCCGCTTGTCTACCCTGCGTCTGTCTCTGATGCTGGTTTGGTTAGAATAGCGTACGGAAATGTAACTTCGGCTATTGCTTCTCCTACCTGGTGTGTTCGTCCTGCTGTTCCGGTTCACCCCAGTGTAAACCCCGCTGTTGGGCTTAATTATGGTTCAGGTTTTACCAATCGGTTCATGAGAGCCAATGCCGTTGATCTTTCGGGTAGTGTGGTTGTGGCTTCCCATGGATATCCTATTAATTTGGGAAATTCGGTTTCTGGTAATGGCTTTGATAATGCCCTTCCTGGCAGCAGCAGGGTGGTTGGAAATGCTGTTCAACAGATAGGTGGTGCTGTTGTACCAGGCGGGATTGGTTTTGGTTCCTTTCTCAGAACTGATCAAGGCAGTAACGAGGGCATGAATGACTCAGTATCTGGACAAAAAATGAAGCTATTGTGCAGCTATGGTGGTAAGATTTTGCCTAGACCCTGTGATGGAAAATTGAGGTATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAGAGGCACGAGCTTCAATGAATTGGCACAAAAGATGACTGATACATATGGGCAGCCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTTGATGCATTGGTTTCGGTTTCCTGCCCTGAGGATCTTGATAATATGATGGAGGAGTATGAAAAATTGATTGAAAGGTCTCCTGATGGCTCTGCTAAATTAAGGGTCTTTCTGTTTTCTGCTTCAGAACTTGATCCTTCTGGTGTGGTGCAGTTTGTAGACTTACAGGATAATGGGCAAAAATACGTTGAAGCTGTGAATGGAATAATAGATGGGATTAGTGGTAAACTGACAAGGAAAGAGAGTATTACAAGTGCAGCTTCCACCCAGAATTCTGATTTGAGTGTGATAGAAGCTCTTGATGGCTCGATTGCTGGTCAAGCCGATGTCAGTCAAGTGCCTTCATCTGGCATGCCTGCGGGAAATGGAACTGCTTCTCAGGATTCTACTTCAAACATGAAGGTTCCTGAAAGCATTGCATCAGTTTACTCAGATGCTTTTGTGATTCCATTGGGCACTTCTGCAACTAATTCTGGTCCAATGCACAATCCACCTTTTCATAATGAGGTCGAATTAGAAAAGTCTGTGCCTGTTACTTTATGCCAGGAGGAATTTGGGTTGCAGCATCCTGTAAAGGAAGCTCCACCACCTGCACCTAATTTGCAAGCTTCGGACATTACTGCAACTAACTCTGGTCCAAATCACCGACAACCTTTCCATAATGAGTTGCAGTTTGAAAAGTCTGTGCCTGTTACTTTATCCCAGCAGCATATTGGGTTGCAGCAACCTGGAATGGAAAATCCTCTGCCTGCACTTTATATGCACCCTCTGATTGATCCTTTCCCAGAAGTTATGAACAATGCAGATTTTTTTCGGCTGCCTCGTCAGATGGGGTTCTCAAATCCTGAGCTTTTCAGCAAGACTGGGTCCATATACTCGCAGCATCAATTACATGAAAATACTCATGGTCTTGTGTCCCATCAAGTGGTCCCTGCTGTGCAAATGACAATGGCTCAGTCATCTTCTCATGCAGGTGTACATTCAAATGCTATTCAACCACAACTATTGCTGCAGATGCAGCAAAATGTCTTGGATAAACATAGTGATGGAAATACATCAGGTGTAAGGATTTTTCAGCTTCCTGCTGAACACAGGTACGGTGCATACCCAGGTCAAGTCCCTTCTGTCATAGTTGGAGGTAGTTACAGCTGGGTTCGGGCTCCTCCACCAGAGCATGTTGTTTTCCCTAATGTATTATTACCCCAACAAACATTAGTGAATCCCGAAAAAACCCAAAGATCAGCGGATTGTTATATGTGTCAGAAAAAGCTACCCTATGCACATTCACATAATATTTGTGCAGGTCTGGTTCCTGATTCAAACCCAAGTTACCATAATCTCCCTATGAATGACAATTCAAAAGCGCAGGCAACAAATAAAGTTGTAGTAACTACAGCAACACCAGAAGGCATGGTTGAGCAAGTAGTTGGGACCAGACCCATGATTGTTAGCAAGTCTGAGCTTGGAGCAGTGCATTATAAAGAAGCAACTGTGCTGTCCTGTAATCTTGGGTCAGAGCCTGAAGGTGAGAGGTATTTCTCACAGAAGCCAGACAATTTGGATCACCAGAATATAATTGTCAAGGAAACAATTGTAGGAGCTGGTGAAAAACAGTTACTAAATGCTGGTCCCACAGGAACAGCACCACTGCCTTATCTAGATGATGTTGTCTGTCAACATGTGATTCCAGTTGAAAACTGGGCTAAAGAAGATGTAATTGTTAATAAACCTATTACTGCTGATATGCCTTTAGTTGGTTGCGCATCTGTTGAAACTTCTCAGTGTACAGTTCAAGAATCTGCAAAAGGTTATACCAATGAACTCACTAGCGTTGTTTCAAAAGCAGATATTGTGGAGAATTGGATTGCAAAGGACCATCTCAAACCTGTTGATTTAAGGGTGGAAGCCCTCAAGATAATCAATCCTGAAAGTTATGCAGACAAACCTGAAGTTCATGCAAGTTATGATAAAGTAGATCACAGTACTCAGTGTTCTGTAGAGAAGAAAGGGGCTTTGGATAACAACCTTAGTAGATCAAGGTTGGATGTCGACACAAATCAAATTAATACGATGGATGTACTTCCTAGTTTTATTATGGAAGTTCCGTATAGTAATAATTCCAGGCCAGCGGATTATAATGAGGTTGCCCAACCCCATGTTCCGGGCATTCCTGATTCAAATCCTCAATCGAAAGAAGGTAATCACAAGGGTGATGTATTCTCATCTTCGACTTCACCATCTGTCAGGTTTGGAGATGCACAGGATTCTTCAAACTCACTTTTTAGCAATCAGGATCCATGGAATATACACGGCTCGTACTTTCCACCACCTAGACCTAAAAAAATTGCATTAGAGAAAGAACATTATTCTTATAAGGACCAGTTTGGTGAGAATCCAGGCAACAGTGCTGAACAGAATGTAGCAGCTCCATTGGATAATGGCCTGGCATTCAAACAGAATTTAACTTTGGAAGATGCTCGATCTGCCAAGGGATCATCCCAGGACCAACAGCTTCAAGCAGTTGCTGAAGGCGTAGCTGCTTCTGTTCTGCACTCAAGCATTCCTTCAAATCCTGAATTGCATGCCAGAGATGTTTCCTTTCTTAGAGAGATAGAGGATGGATATGTTCAAAATAGTGAAATAGATGTACAGTGTAATAGTACAGCACAGGATGTAGAGAGCAAGCTTCCAGAGAAGGCAAATTTTGGTTTTCCAATTACAGATCTTGGAGCATTGCAGGTTATAAAGAATTGTGACCTTGAAGAGCTAGTAGAATTGGGCTCTGGGACCTTTGGTACCGTATATCATGGAAAATGGAGGGGCACGGATGTTGCAATAAAGCGGATTAATGATCGGTGTTTCGCTGGAAAGCCTTCAGAGGAAGAGCGTTTGAGAGCTGACTTTTGGAATGAAGCAATCAAGCTAGCTGACTTGCACCATCCAAATGTGGTAGCTTTTTATGGTGTTGTGCTTGATGGTCCAGGAGGTTCTGTTGCTACAGTAACTGAATATATGGTTAATGGCTCTCTTAGAAATGCCTTGCAGAAGAATGAGAGGAATCTTGACAAGCGCAAACGTCTTTTGATTGCTATGGACGTAGCTTTTGGTATGGAATACCTACACGGGAAAAACATAGTACACTTCGACTTGAAAAGTGACAACTTACTTGTGAATCTGCGAGATCCACACCGCCCAATATGCAAGGTAATGGTTAGTGAGGTTGGTGACCTTGGTCTATCAAAAGTGAAATGTCAGACCCTGATATCTGGGGGTGTGAGAGGAACTCTACCCTGGATGGCCCCAGAACTCTTGAATGGAAGTAACAGCCTTGTCTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTCCTGTGGGAACTTCTCACTGGAGAAGAGCCATATGCTGACTTGCACTATGGAGCTATCATAGGGGGTATTGTGAGCAACACTTTAAGGCCTCCAGTTCCAGAAACCTGTGATCCGGAATGGCGATTACTGATGGAGCGGTGCTGGTCATCTGAGACATCAGAAAGACCAACCTTCACTGAGGTTGCCAATGAATTACGCCAGATGGCAGCCAAGGTCTCCCCCAAAGGACAAAATCAATAG 4383 0.4362 MAFDQTSVPCDLRSLNVTRAVAEEPLVPPASKPLQTAEYFPPNSVWDHVSSGAVPLVYPASVSDAGLVRIAYGNVTSAIASPTWCVRPAVPVHPSVNPAVGLNYGSGFTNRFMRANAVDLSGSVVVASHGYPINLGNSVSGNGFDNALPGSSRVVGNAVQQIGGAVVPGGIGFGSFLRTDQGSNEGMNDSVSGQKMKLLCSYGGKILPRPCDGKLRYVGGQTRIISVRRGTSFNELAQKMTDTYGQPVVIKYQLPDEDLDALVSVSCPEDLDNMMEEYEKLIERSPDGSAKLRVFLFSASELDPSGVVQFVDLQDNGQKYVEAVNGIIDGISGKLTRKESITSAASTQNSDLSVIEALDGSIAGQADVSQVPSSGMPAGNGTASQDSTSNMKVPESIASVYSDAFVIPLGTSATNSGPMHNPPFHNEVELEKSVPVTLCQEEFGLQHPVKEAPPPAPNLQASDITATNSGPNHRQPFHNELQFEKSVPVTLSQQHIGLQQPGMENPLPALYMHPLIDPFPEVMNNADFFRLPRQMGFSNPELFSKTGSIYSQHQLHENTHGLVSHQVVPAVQMTMAQSSSHAGVHSNAIQPQLLLQMQQNVLDKHSDGNTSGVRIFQLPAEHRYGAYPGQVPSVIVGGSYSWVRAPPPEHVVFPNVLLPQQTLVNPEKTQRSADCYMCQKKLPYAHSHNICAGLVPDSNPSYHNLPMNDNSKAQATNKVVVTTATPEGMVEQVVGTRPMIVSKSELGAVHYKEATVLSCNLGSEPEGERYFSQKPDNLDHQNIIVKETIVGAGEKQLLNAGPTGTAPLPYLDDVVCQHVIPVENWAKEDVIVNKPITADMPLVGCASVETSQCTVQESAKGYTNELTSVVSKADIVENWIAKDHLKPVDLRVEALKIINPESYADKPEVHASYDKVDHSTQCSVEKKGALDNNLSRSRLDVDTNQINTMDVLPSFIMEVPYSNNSRPADYNEVAQPHVPGIPDSNPQSKEGNHKGDVFSSSTSPSVRFGDAQDSSNSLFSNQDPWNIHGSYFPPPRPKKIALEKEHYSYKDQFGENPGNSAEQNVAAPLDNGLAFKQNLTLEDARSAKGSSQDQQLQAVAEGVAASVLHSSIPSNPELHARDVSFLREIEDGYVQNSEIDVQCNSTAQDVESKLPEKANFGFPITDLGALQVIKNCDLEELVELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEEERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVMVSEVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSNSLVSEKVDVFSFGIVLWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPETCDPEWRLLMERCWSSETSERPTFTEVANELRQMAAKVSPKGQNQ* 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2246 1460 ProSitePatterns Protein kinases ATP-binding region signature. 1184 1215 IPR017441 GO:0005524
Ahy3g2246 1460 Pfam PB1 domain 212 298 IPR000270 GO:0005515
Ahy3g2246 1460 SMART serkin_6 1178 1449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2246 1460 MobiDBLite consensus disorder prediction 967 1021 - -
Ahy3g2246 1460 Pfam Protein tyrosine and serine/threonine kinase 1182 1446 IPR001245 GO:0004672|GO:0006468
Ahy3g2246 1460 PANTHER SERINE-THREONINE PROTEIN KINASE 163 996 - -
Ahy3g2246 1460 PANTHER SERINE-THREONINE PROTEIN KINASE 992 1453 - -
Ahy3g2246 1460 SUPERFAMILY Protein kinase-like (PK-like) 1172 1445 IPR011009 -
Ahy3g2246 1460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1303 1315 IPR008271 GO:0004672|GO:0006468
Ahy3g2246 1460 MobiDBLite consensus disorder prediction 367 391 - -
Ahy3g2246 1460 MobiDBLite consensus disorder prediction 981 1021 - -
Ahy3g2246 1460 ProSiteProfiles Protein kinase domain profile. 1178 1450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2246 1460 PRINTS Tyrosine kinase catalytic domain signature 1260 1273 IPR001245 GO:0004672|GO:0006468
Ahy3g2246 1460 PRINTS Tyrosine kinase catalytic domain signature 1417 1439 IPR001245 GO:0004672|GO:0006468
Ahy3g2246 1460 PRINTS Tyrosine kinase catalytic domain signature 1297 1315 IPR001245 GO:0004672|GO:0006468
Ahy3g2246 1460 PRINTS Tyrosine kinase catalytic domain signature 1352 1362 IPR001245 GO:0004672|GO:0006468
Ahy3g2246 1460 SUPERFAMILY CAD & PB1 domains 212 301 - -
Ahy3g2246 1460 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 163 996 - -
Ahy3g2246 1460 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 992 1453 - -
Ahy3g2246 1460 SMART PB1_new 210 299 IPR000270 GO:0005515
Ahy3g2246 1460 Gene3D Phosphorylase Kinase; domain 1 1171 1265 - -
Ahy3g2246 1460 Gene3D - 214 299 - -
Ahy3g2246 1460 CDD PB1_UP2 199 297 - -
Ahy3g2246 1460 CDD STKc_MAP3K-like 1184 1446 - -
Ahy3g2246 1460 Gene3D Transferase(Phosphotransferase) domain 1 1266 1460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2246 Ahy-Chr3 77471380 77479552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2246 194 690 MAP Kinase Kinase Kinase AT3G46920 36.111 3.59e-68 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ahy3g2246 PK_Tyr_Ser-Thr 1.80E-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2246 - - ahf:112732322 2834.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2567 13 86013035 86021210 Ahy3g2246 3 77471380 77479552 hybridization
Ahy11g3010 11 147743496 147749450 Ahy3g2246 3 77471380 77479552 PCT
Ahy1g1965 1 96423117 96428171 Ahy3g2246 3 77471380 77479552 PCT
Ahy11g2856 11 146199018 146205094 Ahy3g2246 3 77471380 77479552 PCT
Ahy1g2103 1 98082512 98090466 Ahy3g2246 3 77471380 77479552 PCT
Ahy3g2246 3 77471380 77479552 Ahy11g3010 11 147743496 147749450 PCT
Ahy3g2246 3 77471380 77479552 Ahy1g1965 1 96423117 96428171 PCT