Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2186 ATGGCCAGAACCCCGTTATTATTCACTTCATTGTCATTGCTTTTCACTCAGTTCCTATTCACCCCATTTGATGCTGTTCTTGGTTCAAAAGGATCACTTGAATGCCTTAAAGTTTCTCATGCCGAGTTCACTAACTCAGCGAAAGAAGTTGTTGGTGTCTTGAAAAGTGTTACATCCACTCTGCATTCTGAGTTTGTTAGAAATGGCGGCGGCTTTGTCGATGATCATCGCCTTTCGAGCGCTGTTTCGGCGTGCCTTGAGTTGATGGACTTGTCCTCCGATGAGCTCAGCTGGGTTGTGTCCGTTTCTGAAAGTCCCAAAGGCAAGCATCACGGCACTGGTAATTTGAGCTCTGATTTGAGGACATGGCTAAGTGCTGTTCTTGCCAACACAGACACATGCATGGAAGGATTAGAAGAAGGCACCACCAGCAGTGTCAATAATATAAAGAATGCAGTAACCGCTTCCATCAACAAAGTGAACACAATGGTCCAGGATCTCCTAACACAGGTGCACCCTGTTTCGTATAACAGGGTGAGCAAGAGCAAACTTGAGTTTCCTTCTTGGGCCGAATCAGAGGATCTTGAGGGTAAAAAGTTGCTAACGGCGGTGGATGCCGTGGTGGCTTTGGATGGGAGTGGGGACTACACACGTGTGAAGGATGCTGTGGAATCAGCGCCTGAGTATAGCATGAAACGTTATGTGATACACATTAAGAAGGGTGTGTATTGTGAGAAAGTTGAGATCCATAGCAAGAAGTGGAACCTTGTGATGATTGGAGATGGAATGGAGAATACCGTTATCACTGGTAACTCGAGTCGTTATTTCAATAATACCACCACATACATGACTGCAACCTTTGCTGTGGAAGGCAGAGGGTTTATAGCACAAAACATTTCCTTCCATAACACTGCAGGACCAAGAGGGAGCCAAGCAGTAGCTCTAAGATCACAATCCGATCTCTCAGTCTTCTACCGCTGCGAAATCTCCGGCTACCAAGACAGCCTCTACGCCCACTCCAACCGCCAATTCTACCGAGAGTCCATCATCACCGGCACTGTAGACTTCATCTTCGGCCGCGCCGCCGCAGTCTTCCAGAACTGCACCATACTTGCCAAGAAAGGCTTACCGGAACAAACCAACACCATAACCGCTCAAGGCGCAAACGACTCCACCTCACCCTCCGGCTTCTCCATCCAGTTCAGCAACATCTCTGCACATTCTGAACTTCTACCTTTCTTGAACTGCACAAGAACGTACCTTGGGAGACCATGGAAGGAGTATTCGAGAACGGTTTTCATGCAATCTTACATGAGCGAGATGGTGAGCCCGCAAGGGTGGAAAGAATGGAATGGGACGTTGTATTTGGACACACTTTACTATGGTGAGTTCATGAATTATGGGCCTGGATCTGGGCTTTCTGAGAGAGTGAAATGGCCAGGGTATCATGTTATCAATGACTATGATGAAGCTAGTAACTTCACGGTGGCCCAATTTATTCTGGGGGATCTATGGTTGCCATCAACGGGTGTGAATTATGCATCTGGTTTCACTAAATAG 1560 0.4712 MARTPLLFTSLSLLFTQFLFTPFDAVLGSKGSLECLKVSHAEFTNSAKEVVGVLKSVTSTLHSEFVRNGGGFVDDHRLSSAVSACLELMDLSSDELSWVVSVSESPKGKHHGTGNLSSDLRTWLSAVLANTDTCMEGLEEGTTSSVNNIKNAVTASINKVNTMVQDLLTQVHPVSYNRVSKSKLEFPSWAESEDLEGKKLLTAVDAVVALDGSGDYTRVKDAVESAPEYSMKRYVIHIKKGVYCEKVEIHSKKWNLVMIGDGMENTVITGNSSRYFNNTTTYMTATFAVEGRGFIAQNISFHNTAGPRGSQAVALRSQSDLSVFYRCEISGYQDSLYAHSNRQFYRESIITGTVDFIFGRAAAVFQNCTILAKKGLPEQTNTITAQGANDSTSPSGFSIQFSNISAHSELLPFLNCTRTYLGRPWKEYSRTVFMQSYMSEMVSPQGWKEWNGTLYLDTLYYGEFMNYGPGSGLSERVKWPGYHVINDYDEASNFTVAQFILGDLWLPSTGVNYASGFTK* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2186 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 172 IPR035513 -
Ahy3g2186 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 165 IPR035513 -
Ahy3g2186 519 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 38 517 - -
Ahy3g2186 519 PANTHER PECTINESTERASE 38 517 - -
Ahy3g2186 519 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Ahy3g2186 519 CDD PMEI-like_4 18 175 - -
Ahy3g2186 519 Pfam Pectinesterase 205 503 IPR000070 GO:0030599|GO:0042545
Ahy3g2186 519 Gene3D - 201 517 IPR012334 -
Ahy3g2186 519 Pfam Plant invertase/pectin methylesterase inhibitor 38 155 IPR006501 GO:0004857
Ahy3g2186 519 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Ahy3g2186 519 SMART PMEI_2 39 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2186 Ahy-Chr3 68762441 68766180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2186 33 517 Carbohydrate Esterase AT3G43270 54.781 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2186 K01051 - gmx:100798620 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2434 13 56188054 56192424 Ahy3g2186 3 68762441 68766180 hybridization
Ahy1g1733 1 93414617 93417931 Ahy3g2186 3 68762441 68766180 PCT
Ahy3g2186 3 68762441 68766180 Ahy1g1733 1 93414617 93417931 PCT